wsio.org
type: Ontology
version IRI: wsio.org.owl
date: 19:06:2014 23:03
default-namespace: WSIO
default-relationship-id-prefix: WSIO
has_obo_format_version: 1.2
next-id: 032
saved-by: Matus Kalas
comment: Acknowledgement for technical support: Torbjorn Lium, Lorand Janos Szentennai, Stanislav Oltu.
comment: Author: Matus Kalas, (c) 2011-2014, Computational Biology Unit, Department of Informatics, University of Bergen, Norway.
comment: Licence: Available under the Creative Commons BY-ND 3.0 licence with allowed attributed reference to, and import of, unmodified(
comment: PIs: Inge Jonassen, Kjell Petersen, Ibid.
comment: Web Service Interaction Ontology (WSIO) enables automated interaction with more complex Web services that are typical for example within life sciences. WSIO is however independent of the application domain and relevant for both SOAP and REST Web services, and for batch execution engines in general. If the interaction scenario with a Web service is nontrivial (and incorporates session handling), annotation with WSIO concepts will enable automatic generation of client programs, scripts, or interactive applications with a graphical user interface. WSIO also enables automation of different ways of data transfer and data un-/compression or en-/decoding. We strongly discourage providers from developing complex interaction and data-transfer/compression scenarios, however when needed, WSIO may enable smooth automated interaction with them. Future versions will support more interaction scenarios. WSIO aims to serve also as a means to standardise the complex interaction scenarios primarily within both SOAP and REST Web services, and secondarily to apply also to batch execution infrastructure in general.

Created in
type: AnnotationProperty
definition: 'Created in' specificies the released version of the ontology since which the concept has been added and its ID created.
has_obo_namespace: WSIO
id: created_in
in_subset: concept properties
is metadata tag: true
shorthand: created_in

Axiom
annotated source: Created in
annotated property: definition
annotated target: 'Created in' specificies the released version of the ontology since which the concept has been added and its ID created.
database_cross_reference: http://wsio.org

Documentation
type: AnnotationProperty
definition: 'Documentation' concept attribute ('documentation' metadata tag) is pointing to a page with explanation, description, documentation, or specification of the given data compression or encoding.
has_narrow_synonym: Specification
has_obo_namespace: WSIO
id: documentation
in_subset: concept properties
is metadata tag: true
shorthand: documentation
comment: Does not handle different versions of the specification or of the concept itself. Within WSIO, 'Documentation' applies to concrete forms of data transfer ('Transfer') and data compression/encoding ('Compression').

Axiom
annotated source: Documentation
annotated property: definition
annotated target: 'Documentation' concept attribute ('documentation' metadata tag) is pointing to a page with explanation, description, documentation, or specification of the given data compression or encoding.
database_cross_reference: http://wsio.org

Axiom
annotated source: Documentation
annotated property: has_narrow_synonym
annotated target: Specification
database_cross_reference: http://wsio.org

Example
type: AnnotationProperty
definition: 'Example' concept attribute ('example' metadata tag) lists examples of valid values of types of identifiers (accessions). Applicable to some other types of data, too.
has_obo_namespace: WSIO
id: example
in_subset: concept properties
is metadata tag: true
shorthand: example

Axiom
annotated source: Example
annotated property: definition
annotated target: 'Example' concept attribute ('example' metadata tag) lists examples of valid values of types of identifiers (accessions). Applicable to some other types of data, too.
database_cross_reference: http://wsio.org

Obsolete Since
type: AnnotationProperty
definition: 'Obsolete_since' specificies the released version of the ontology since which the concept has been obsolete.
has_obo_namespace: WSIO
id: obsolete_since
in_subset: concept properties
is metadata tag: true
shorthand: obsolete_since

Axiom
annotated source: Obsolete Since
annotated property: definition
annotated target: 'Obsolete_since' specificies the released version of the ontology since which the concept has been obsolete.
database_cross_reference: http://wsio.org

Regular expression
type: AnnotationProperty
definition: 'Regular expression' concept attribute specifies the allowed values of types of identifiers (accessions). Applicable to some other types of data, too.
has_obo_namespace: WSIO
id: regex
in_subset: concept properties
is metadata tag: true
shorthand: regex

Axiom
annotated source: Regular expression
annotated property: definition
annotated target: 'Regular expression' concept attribute specifies the allowed values of types of identifiers (accessions). Applicable to some other types of data, too.
database_cross_reference: http://wsio.org

definition
type: AnnotationProperty

antisymmetric property
type: AnnotationProperty

compressions
type: AnnotationProperty
comment: WSIO Compression sub-ontology
sub property of: subset_property

Axiom
annotated source: compressions
annotated property: subPropertyOf
annotated target: subset_property
note: The top-level-rooted WSIO 'Compression' sub-ontology includes forms of compression and binary-to-text encoding, and their combinations, that are relevant with respect to input and output data of Web services. Concepts of WSIO 'Compression' sub-ontology are applicable also outside of the context of Web-service interaction.

concept properties
type: AnnotationProperty
comment: WSIO concept properties
sub property of: subset_property

Axiom
annotated source: concept properties
annotated property: subPropertyOf
annotated target: subset_property
note: Additional tags of metadata of WSIO concepts, or their trailing modifiers or qualifiers. Applicable also outside of the context of Web-service interaction.

Concept URI
type: AnnotationProperty
definition: 'Concept URI' metadata tag in the OBO format ('! concept_uri: ') defines the canonical global URI of a concept.
has_broad_synonym: Global unique identifier
has_exact_synonym: Global Unified Resource Identifier (URI)
has_obo_namespace: WSIO
id: concept_uri
in_subset: concept properties
is metadata tag: true

Axiom
annotated source: Concept URI
annotated property: has_broad_synonym
annotated target: Global unique identifier
database_cross_reference: http://wsio.org

Axiom
annotated source: Concept URI
annotated property: has_exact_synonym
annotated target: Global Unified Resource Identifier (URI)
database_cross_reference: http://wsio.org

Axiom
annotated source: Concept URI
annotated property: definition
annotated target: 'Concept URI' metadata tag in the OBO format ('! concept_uri: ') defines the canonical global URI of a concept.
database_cross_reference: http://wsio.org

data
type: AnnotationProperty
comment: WSIO Data sub-ontology
sub property of: subset_property

Axiom
annotated source: data
annotated property: subPropertyOf
annotated target: subset_property
note: The top-level-rooted WSIO 'Data' sub-ontology includes types of data that are relevant with respect to interaction scenarios with Web services, including session handling (for example 'explicit polling' within asynchronous invocation). Concepts of WSIO 'Data' sub-ontology are applicable also outside of the context of Web-service interaction.

Note
type: AnnotationProperty
definition: 'Note' trailing modifier ('note=') of any concept or ontology attributes. Contains a note for a human reader related to the given attribute.
has_obo_namespace: WSIO
id: note
in_subset: concept properties
is metadata tag: true

Axiom
annotated source: Note
annotated property: definition
annotated target: 'Note' trailing modifier ('note=') of any concept or ontology attributes. Contains a note for a human reader related to the given attribute.
database_cross_reference: http://wsio.org

operations
type: AnnotationProperty
comment: WSIO Operation sub-ontology
sub property of: subset_property

Axiom
annotated source: operations
annotated property: subPropertyOf
annotated target: subset_property
note: The top-level-rooted WSIO 'Operation' sub-ontology includes operations that are relevant with respect to interaction scenarios with Web services, including session handling (for example 'explicit polling' within asynchronous invocation). Some concepts of WSIO 'Operation' sub-ontology are applicable also outside of the context of Web-service interaction.

relations
type: AnnotationProperty
comment: WSIO relation types
sub property of: subset_property

Axiom
annotated source: relations
annotated property: subPropertyOf
annotated target: subset_property
note: Types of relations defined between concepts of WSIO, or available to be used for annotations of external entities' relations to concepts or external entities. All relation types are applicable also outside of the context of Web-service interaction.

supportedByEsysbio
type: AnnotationProperty
comment: Supported by eSysbio
sub property of: subset_property

Axiom
annotated source: supportedByEsysbio
annotated property: subPropertyOf
annotated target: subset_property
note: Functionality denoted by these concepts is supported by the eSysbio system (http://esysbio.org) within the automated Web-service invocation and input/output data handling.

transfers
type: AnnotationProperty
comment: WSIO Transfer sub-ontology
sub property of: subset_property

Axiom
annotated source: transfers
annotated property: subPropertyOf
annotated target: subset_property
note: The top-level-rooted WSIO 'Transfer' sub-ontology includes forms of transfer and transfer protocols that are relevant with respect to transferring input and output data to and from Web services. Some concepts of WSIO 'Transfer' sub-ontology are applicable also outside of the context of Web-service interaction.

subset_property
type: AnnotationProperty

has_broad_synonym
type: AnnotationProperty

database_cross_reference
type: AnnotationProperty

has_exact_synonym
type: AnnotationProperty

has_narrow_synonym
type: AnnotationProperty

has_obo_format_version
type: AnnotationProperty

has_obo_namespace
type: AnnotationProperty

has_related_synonym
type: AnnotationProperty

in_subset
type: AnnotationProperty

shorthand
type: AnnotationProperty

has function
type: ObjectProperty
inverse of: is function of
property chain axiom: is a
definition: 'A has_function B' defines for the subject A, that it has the object B as its function.
antisymmetric property: false
has_narrow_synonym: has_function
has_obo_namespace: WSIO
has_related_synonym: bearer_of
id: has_function
in_subset: relations
is cyclic: true
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
shorthand: has_function
comment: Subject A can be any concept or entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated). Object B can either be a concept that is (or is in a role of) a function, or an entity outside of an ontology that is (or is in a role of) a function specification. In the scope of WSIO, 'has_function' serves only for relating annotated entities outside of WSIO with 'Operation' concepts.

Axiom
annotated source: has function
annotated property: definition
annotated target: 'A has_function B' defines for the subject A, that it has the object B as its function.
database_cross_reference: http://wsio.org

Axiom
annotated source: has function
annotated property: has_narrow_synonym
annotated target: has_function
database_cross_reference: http://purl.obolibrary.org/obo/OBI_0000306
note: 'OBI:has_function' only relates subjects that are an 'independent_continuant' (snap:IndependentContinuant), so for example no processes, with objects that are a 'function' (snap:Function). It does not define explicitly that the object is a function of the subject.

Axiom
annotated source: has function
annotated property: has_related_synonym
annotated target: bearer_of
database_cross_reference: OBO_REL:bearer_of
note: Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:bearer_of' is narrower in the sense that it only relates ontological categories (concepts) that are an 'independent_continuant' (snap:IndependentContinuant) with ontological categories that are a 'specifically_dependent_continuant' (snap:SpecificallyDependentContinuant), and broader in the sense that it relates with any borne objects not just functions of the subject.

has input
type: ObjectProperty
inverse of: is input of
property chain axiom: is a
definition: 'A has_input B' defines for the subject A, that it has the object B as a necessary or actual input or input argument.
antisymmetric property: false
has_narrow_synonym: has_specified_input
has_obo_namespace: WSIO
has_related_synonym: has_participant
id: has_input
in_subset: relations
is cyclic: true
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
shorthand: has_input
comment: Subject A can either be concept that is or has an 'Operation' function, or an entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated) that has an 'Operation' function or is an 'Operation'. Object B can be any concept or entity. In WSIO, only 'has_input' is explicitly defined between WSIO concepts, not the inverse 'is_input_of'.

Axiom
annotated source: has input
annotated property: definition
annotated target: 'A has_input B' defines for the subject A, that it has the object B as a necessary or actual input or input argument.
database_cross_reference: http://wsio.org

Axiom
annotated source: has input
annotated property: has_narrow_synonym
annotated target: has_specified_input
database_cross_reference: http://purl.obolibrary.org/obo/OBI_0000293
note: 'OBI:has_specified_input' only relates subjects that are a 'planned process' (http://purl.obolibrary.org/obo/OBI_0000011) with objects that are a 'continuant' (snap:Continuant).

Axiom
annotated source: has input
annotated property: has_related_synonym
annotated target: has_participant
database_cross_reference: OBO_REL:has_participant
note: 'OBO_REL:has_participant' is narrower in the sense that it only relates ontological categories (concepts) that are a 'process' (span:Process) with ontological categories that are a 'continuant' (snap:Continuant), and broader in the sense that it relates with any participating objects not just inputs or input arguments of the subject.

has output
type: ObjectProperty
inverse of: is output of
property chain axiom: is a
definition: 'A has_output B' defines for the subject A, that it has the object B as a necessary or actual output or output argument.
antisymmetric property: false
has_narrow_synonym: has_specified_output
has_obo_namespace: WSIO
has_related_synonym: has_participant
id: has_output
in_subset: relations
is cyclic: true
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
shorthand: has_output
comment: Subject A can either be concept that is or has an 'Operation' function, or an entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated) that has an 'Operation' function or is an 'Operation'. Object B can be any concept or entity. In WSIO, only 'has_output' is explicitly defined between WSIO concepts, not the inverse 'is_output_of'.

Axiom
annotated source: has output
annotated property: definition
annotated target: 'A has_output B' defines for the subject A, that it has the object B as a necessary or actual output or output argument.
database_cross_reference: http://wsio.org

Axiom
annotated source: has output
annotated property: has_narrow_synonym
annotated target: has_specified_output
database_cross_reference: http://purl.obolibrary.org/obo/OBI_0000299
note: 'OBI:has_specified_output' only relates subjects that are a 'planned process' (http://purl.obolibrary.org/obo/OBI_0000011) with objects that are a 'continuant' (snap:Continuant).

Axiom
annotated source: has output
annotated property: has_related_synonym
annotated target: has_participant
database_cross_reference: OBO_REL:has_participant
note: 'OBO_REL:has_participant' is narrower in the sense that it only relates ontological categories (concepts) that are a 'process' (span:Process) with ontological categories that are a 'continuant' (snap:Continuant), and broader in the sense that it relates with any participating objects not just outputs or output arguments of the subject. It is also not clear whether an output (result) actually participates in the process that generates it.

is function of
type: ObjectProperty
property chain axiom: is a
definition: 'A is_function_of B' defines for the subject A, that it is a function of the object B.
antisymmetric property: false
has_narrow_synonym: function_of
has_obo_namespace: WSIO
has_related_synonym: inheres_in
id: is_function_of
in_subset: relations
is cyclic: true
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
shorthand: is_function_of
comment: Subject A can either be concept that is (or is in a role of) a function, or an entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated) that is (or is in a role of) a function specification. Object B can be any concept or entity. Within WSIO itself, 'is_function_of' is not used.

Axiom
annotated source: is function of
annotated property: definition
annotated target: 'A is_function_of B' defines for the subject A, that it is a function of the object B.
database_cross_reference: http://wsio.org

Axiom
annotated source: is function of
annotated property: has_narrow_synonym
annotated target: function_of
database_cross_reference: OBO_REL:function_of
note: Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:function_of' only relates subjects that are a 'function' (snap:Function) with objects that are an 'independent_continuant' (snap:IndependentContinuant), so for example no processes. It does not define explicitly that the subject is a function of the object.

Axiom
annotated source: is function of
annotated property: has_related_synonym
annotated target: inheres_in
database_cross_reference: OBO_REL:inheres_in
note: Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:inheres_in' is narrower in the sense that it only relates ontological categories (concepts) that are a 'specifically_dependent_continuant' (snap:SpecificallyDependentContinuant) with ontological categories that are an 'independent_continuant' (snap:IndependentContinuant), and broader in the sense that it relates any borne subjects not just functions.

is input of
type: ObjectProperty
property chain axiom: is a
definition: 'A is_input_of B' defines for the subject A, that it as a necessary or actual input or input argument of the object B.
antisymmetric property: false
has_narrow_synonym: is_specified_input_of
has_obo_namespace: WSIO
has_related_synonym: participates_in
id: is_input_of
in_subset: relations
is cyclic: true
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
shorthand: is_input_of
comment: Subject A can be any concept or entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated). Object B can either be a concept that is or has an 'Operation' function, or an entity outside of an ontology that has an 'Operation' function or is an 'Operation'. In WSIO, 'is_input_of' is not explicitly defined between WSIO concepts, only the inverse 'has_input'.

Axiom
annotated source: is input of
annotated property: definition
annotated target: 'A is_input_of B' defines for the subject A, that it as a necessary or actual input or input argument of the object B.
database_cross_reference: http://wsio.org

Axiom
annotated source: is input of
annotated property: has_narrow_synonym
annotated target: is_specified_input_of
database_cross_reference: http://purl.obolibrary.org/obo/OBI_0000295
note: 'OBI:is_specified_input_of' only relates subjects that are a 'continuant' (snap:Continuant) with objects that are a 'planned process' (http://purl.obolibrary.org/obo/OBI_0000011).

Axiom
annotated source: is input of
annotated property: has_related_synonym
annotated target: participates_in
database_cross_reference: OBO_REL:participates_in
note: 'OBO_REL:participates_in' is narrower in the sense that it only relates ontological categories (concepts) that are a 'continuant' (snap:Continuant) with ontological categories that are a 'process' (span:Process), and broader in the sense that it relates any participating subjects not just inputs or input arguments.

is output of
type: ObjectProperty
property chain axiom: is a
definition: 'A is_output_of B' defines for the subject A, that it as a necessary or actual output or output argument of the object B.
antisymmetric property: false
has_narrow_synonym: is_specified_output_of
has_obo_namespace: WSIO
has_related_synonym: participates_in
id: is_output_of
in_subset: relations
is cyclic: true
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
shorthand: is_output_of
comment: Subject A can be any concept or entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated). Object B can either be a concept that is or has an 'Operation' function, or an entity outside of an ontology that has an 'Operation' function or is an 'Operation'. In WSIO, 'is_output_of' is not explicitly defined between WSIO concepts, only the inverse 'has_output'.

Axiom
annotated source: is output of
annotated property: definition
annotated target: 'A is_output_of B' defines for the subject A, that it as a necessary or actual output or output argument of the object B.
database_cross_reference: http://wsio.org

Axiom
annotated source: is output of
annotated property: has_narrow_synonym
annotated target: is_specified_output_of
database_cross_reference: http://purl.obolibrary.org/obo/OBI_0000312
note: 'OBI:is_specified_output_of' only relates subjects that are a 'continuant' (snap:Continuant) with objects that are a 'planned process' (http://purl.obolibrary.org/obo/OBI_0000011).

Axiom
annotated source: is output of
annotated property: has_related_synonym
annotated target: participates_in
database_cross_reference: OBO_REL:participates_in
note: 'OBO_REL:participates_in' is narrower in the sense that it only relates ontological categories (concepts) that are a 'continuant' (snap:Continuant) with ontological categories that are a 'process' (span:Process), and broader in the sense that it relates any participating subjects not just outputs or output arguments. It is also not clear whether an output (result) actually participates in the process that generates it.

has compression
type: ObjectProperty
inverse of: is compression of
property chain axiom: is a
definition: 'A has_compression B' defines for the subject A, that it has the object B as its compression (form of compression, compressed format), and/or binary-to-text encoding.
antisymmetric property: false
has_narrow_synonym: has transfer compression
has_obo_namespace: WSIO
has_related_synonym: has_quality
id: has_compression
in_subset: relations
is cyclic: false
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
comment: Subject A can be any concept or entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated) that is (or is in a role of) an input, output, input argument, or output argument of an 'Operation'. Object B can either be a concept that is a 'Compression' (or has a 'Compression' function), or an entity outside of an ontology that has a 'Compression' function or is a 'Compression' (a compression/encoding method or format specification). In the scope of WSIO, 'has_compression' serves only for relating annotated entities outside of WSIO with 'Compression' concepts.

Axiom
annotated source: has compression
annotated property: definition
annotated target: 'A has_compression B' defines for the subject A, that it has the object B as its compression (form of compression, compressed format), and/or binary-to-text encoding.
database_cross_reference: http://wsio.org

Axiom
annotated source: has compression
annotated property: has_narrow_synonym
annotated target: has transfer compression
database_cross_reference: http://wsio.org

Axiom
annotated source: has compression
annotated property: has_related_synonym
annotated target: has_quality
database_cross_reference: http://purl.obolibrary.org/obo/OBI_0000298
note: 'OBI:has_quality' might be seen narrower in the sense that it only relates subjects that are an 'independent_continuant' (snap:IndependentContinuant) with objects that are a 'quality' (snap:Quality), and is broader in the sense that it relates with any qualities of the subject.

has transfer
type: ObjectProperty
inverse of: is transfer of
property chain axiom: is a
definition: 'A has_transfer B' defines for the subject A, that it has the object B as its transfer (form of transfer, transfer protocol).
antisymmetric property: false
has_obo_namespace: WSIO
has_related_synonym: has_quality
id: has_transfer
in_subset: relations
is cyclic: false
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
comment: Subject A can be any concept or entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated) that is (or is in a role of) an input, output, input argument, or output argument of an 'Operation'. Object B can either be a concept that is a 'Transfer' (or has a 'Transfer' function), or an entity outside of an ontology that has a 'Transfer' function or is a 'Transfer' (a transfer specification). In the scope of WSIO, 'has_transfer' serves only for relating annotated entities outside of WSIO with 'Transfer' concepts.

Axiom
annotated source: has transfer
annotated property: definition
annotated target: 'A has_transfer B' defines for the subject A, that it has the object B as its transfer (form of transfer, transfer protocol).
database_cross_reference: http://wsio.org

Axiom
annotated source: has transfer
annotated property: has_related_synonym
annotated target: has_quality
database_cross_reference: http://purl.obolibrary.org/obo/OBI_0000298
note: 'OBI:has_quality' might be seen narrower in the sense that it only relates subjects that are an 'independent_continuant' (snap:IndependentContinuant) with objects that are a 'quality' (snap:Quality), and is broader in the sense that it relates with any qualities of the subject.

is compression of
type: ObjectProperty
property chain axiom: is a
definition: 'A is_compression_of B' defines for the subject A, that it is a compression (form of compression, compressed format), and/or binary-to-text encoding, of the object B.
antisymmetric property: false
has_narrow_synonym: is transfer compression of
has_obo_namespace: WSIO
has_related_synonym: quality_of
id: is_compression_of
in_subset: relations
is cyclic: false
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
comment: Subject A can either be a concept that is a 'Compression' (or has a 'Compression' function), or an entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated) that has a 'Compression' function or is a 'Compression' (a compression/encoding method or format specification). Object B can be any concept or entity outside of an ontology that is (or is in a role of) an input, output, input argument, or output argument of an 'Operation'. Within WSIO itself, 'is_compression_of' is not used.

Axiom
annotated source: is compression of
annotated property: definition
annotated target: 'A is_compression_of B' defines for the subject A, that it is a compression (form of compression, compressed format), and/or binary-to-text encoding, of the object B.
database_cross_reference: http://wsio.org

Axiom
annotated source: is compression of
annotated property: has_narrow_synonym
annotated target: is transfer compression of
database_cross_reference: http://wsio.org

Axiom
annotated source: is compression of
annotated property: has_related_synonym
annotated target: quality_of
database_cross_reference: OBO_REL:quality_of
note: Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:quality_of' might be seen narrower in the sense that it only relates subjects that are a 'quality' (snap:Quality) with objects that are an 'independent_continuant' (snap:IndependentContinuant), and is broader in the sense that it relates any qualities of the object.

is transfer of
type: ObjectProperty
property chain axiom: is a
definition: 'A is_transfer_of B' defines for the subject A, that it is a transfer (form of transfer, transfer protocol) of the object B.
antisymmetric property: false
has_obo_namespace: WSIO
has_related_synonym: quality_of
id: is_transfer_of
in_subset: relations
is cyclic: false
is metadata tag: false
is reflexive: false
is symmetric: false
is transitive: false
comment: Subject A can either be a concept that is a 'Transfer' (or has a 'Transfer' function), or an entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated) that has a 'Transfer' function or is a 'Transfer' (a transfer specification). Object B can be any concept or entity outside of an ontology that is (or is in a role of) an input, output, input argument, or output argument of an 'Operation'. Within WSIO itself, 'is_transfer_of' is not used.

Axiom
annotated source: is transfer of
annotated property: definition
annotated target: 'A is_transfer_of B' defines for the subject A, that it is a transfer (form of transfer, transfer protocol) of the object B.
database_cross_reference: http://wsio.org

Axiom
annotated source: is transfer of
annotated property: has_related_synonym
annotated target: quality_of
database_cross_reference: OBO_REL:quality_of
note: Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:quality_of' might be seen narrower in the sense that it only relates subjects that are a 'quality' (snap:Quality) with objects that are an 'independent_continuant' (snap:IndependentContinuant), and is broader in the sense that it relates any qualities of the object.

Compression or encoding
type: Class
definition: Compression (form of data compression), a form of encoding of binary data, or a sequence of compression and encoding methods, are the ways data is compressed and/or eventually encoded to decrease its volume (and eventually be exchanged in text format). They imply the way compressed/encoded data should be decompressed/decoded to be readable in its original form again.
has_broad_synonym: continuant
has_exact_synonym: Data compression and encoding
has_exact_synonym: Data compression and/or encoding method
has_exact_synonym: Form of data compression and/or encoding
has_exact_synonym: Type of data compression and/or encoding
has_narrow_synonym: Compressed and/or encoded data format
has_obo_namespace: WSIO
has_related_synonym: Format
has_related_synonym: Operation
has_related_synonym: Process
has_related_synonym: function
has_related_synonym: process
has_related_synonym: quality
id: WSIO_compression:004
in_subset: compressions
comment: A top-level concept in WSIO rooting the 'Compression' sub-ontology. WSIO 'Compression' sub-ontology includes forms of compression and binary-to-text encoding, and their combinations, that are relevant with respect to input and output data of Web services. Concepts of WSIO 'Compression' sub-ontology are applicable also outside of the context of Web-service interaction.

Axiom
annotated source: Compression or encoding
annotated property: definition
annotated target: Compression (form of data compression), a form of encoding of binary data, or a sequence of compression and encoding methods, are the ways data is compressed and/or eventually encoded to decrease its volume (and eventually be exchanged in text format). They imply the way compressed/encoded data should be decompressed/decoded to be readable in its original form again.
database_cross_reference: http://wsio.org

Axiom
annotated source: Compression or encoding
annotated property: has_broad_synonym
annotated target: continuant
database_cross_reference: snap:Continuant

Axiom
annotated source: Compression or encoding
annotated property: has_exact_synonym
annotated target: Data compression and encoding
database_cross_reference: http://wsio.org

Axiom
annotated source: Compression or encoding
annotated property: has_exact_synonym
annotated target: Data compression and/or encoding method
database_cross_reference: http://wsio.org
note: However, one should note that 'Compression and encoding' is not limited only to explicit compression, encoding, or combined methods or algorithms.

Axiom
annotated source: Compression or encoding
annotated property: has_exact_synonym
annotated target: Form of data compression and/or encoding
database_cross_reference: http://wsio.org

Axiom
annotated source: Compression or encoding
annotated property: has_exact_synonym
annotated target: Type of data compression and/or encoding
database_cross_reference: http://wsio.org

Axiom
annotated source: Compression or encoding
annotated property: has_narrow_synonym
annotated target: Compressed and/or encoded data format
database_cross_reference: http://wsio.org
note: The same concept in the case when 'Compression and encoding' is used in a role of semantically annotating data entities.

Axiom
annotated source: Compression or encoding
annotated property: has_related_synonym
annotated target: Format
database_cross_reference: http://edamontology.org/format_1915
note: A broader concept in the case when the 'Compression' sub-ontology is used in a role of semantically annotating data entities. Narrower in the sense of being limited to data format.

Axiom
annotated source: Compression or encoding
annotated property: has_related_synonym
annotated target: Operation
database_cross_reference: http://wsio.org/operation_001
note: Form of data compression and/or encoding is related to operations of compressing, decompressing, encoding, and decoding data.

Axiom
annotated source: Compression or encoding
annotated property: has_related_synonym
annotated target: Process
database_cross_reference: http://wsio.org
note: Form of data compression and/or encoding is related to processes of compressing, decompressing, encoding, and decoding data.

Axiom
annotated source: Compression or encoding
annotated property: has_related_synonym
annotated target: function
database_cross_reference: snap:Function
note: Form of data compression and/or encoding is related to functions of compressing, decompressing, encoding, and decoding data.

Axiom
annotated source: Compression or encoding
annotated property: has_related_synonym
annotated target: process
database_cross_reference: span:Process
note: Form of data compression and/or encoding is related to processes of compressing, decompressing, encoding, and decoding data.

Axiom
annotated source: Compression or encoding
annotated property: has_related_synonym
annotated target: quality
database_cross_reference: snap:Quality
note: BFO 'quality' is narrower in the sense that it is a 'dependent_continuant' (snap:DependentContinuant), and broader in the sense that it is any quality not just the form of data compression and/or encoding.

Data compression
type: Class
subclass of: Compression or encoding
definition: Data compression (form of data compression) is the way data is compressed to decrease its volume, and the implied way how it should be decompressed to be readable in its original form again. It may include archiving of multiple files.
has_exact_synonym: Data compression method
has_exact_synonym: Form of data compression
has_exact_synonym: Type of data compression
has_narrow_synonym: Compressed data format
has_obo_namespace: WSIO
has_related_synonym: Binary format
id: WSIO_compression:014
in_subset: compressions

Axiom
annotated source: Data compression
annotated property: definition
annotated target: Data compression (form of data compression) is the way data is compressed to decrease its volume, and the implied way how it should be decompressed to be readable in its original form again. It may include archiving of multiple files.
database_cross_reference: http://wsio.org

Axiom
annotated source: Data compression
annotated property: has_exact_synonym
annotated target: Data compression method
database_cross_reference: http://wsio.org
note: However, one should note that 'Data compression' is not limited only to an explicit compression method and not to an explicit compression algorithm.

Axiom
annotated source: Data compression
annotated property: has_exact_synonym
annotated target: Form of data compression
database_cross_reference: http://wsio.org

Axiom
annotated source: Data compression
annotated property: has_exact_synonym
annotated target: Type of data compression
database_cross_reference: http://wsio.org

Axiom
annotated source: Data compression
annotated property: has_narrow_synonym
annotated target: Compressed data format
database_cross_reference: http://wsio.org
note: The same concept in the case when 'Data compression' is used in a role of semantically annotating data entities.

Axiom
annotated source: Data compression
annotated property: has_related_synonym
annotated target: Binary format
database_cross_reference: http://edamontology.org/format_2333
note: Typically, but not necessarily, the format of compressed data is binary. Applies when 'Data compression' is used in a role of semantically annotating compressed data entities.

Binary-to-text encoding
type: Class
subclass of: Compression or encoding
definition: Data compression (type of data compression), an encoding method of binary data, or a sequence of compression and encoding methods, are the ways data is compressed and/or eventually encoded.
has_exact_synonym: Data compression method
has_exact_synonym: Form of data compression
has_exact_synonym: Type of data compression
has_narrow_synonym: Binary-to-text encoded format
has_obo_namespace: WSIO
has_related_synonym: Text format
id: WSIO_compression:015
in_subset: compressions

Axiom
annotated source: Binary-to-text encoding
annotated property: definition
annotated target: Data compression (type of data compression), an encoding method of binary data, or a sequence of compression and encoding methods, are the ways data is compressed and/or eventually encoded.
database_cross_reference: http://wsio.org

Axiom
annotated source: Binary-to-text encoding
annotated property: has_exact_synonym
annotated target: Data compression method
database_cross_reference: http://wsio.org
note: However, one should note that 'Data compression' is not limited only to an explicit compression method and not to an explicit compression algorithm.

Axiom
annotated source: Binary-to-text encoding
annotated property: has_exact_synonym
annotated target: Form of data compression
database_cross_reference: http://wsio.org

Axiom
annotated source: Binary-to-text encoding
annotated property: has_exact_synonym
annotated target: Type of data compression
database_cross_reference: http://wsio.org

Axiom
annotated source: Binary-to-text encoding
annotated property: has_narrow_synonym
annotated target: Binary-to-text encoded format
database_cross_reference: http://wsio.org
note: The same concept in the case when 'Binary-to-text encoding' is used in a role of semantically annotating encoded data entities.

Axiom
annotated source: Binary-to-text encoding
annotated property: has_related_synonym
annotated target: Text format
database_cross_reference: http://edamontology.org/format_2330
note: A broader concept in the case when the 'Binary-to-text encoding' is used in a role of semantically annotating encoded data entities. Narrower in the sense of being limited to data format.

Combination of compression and encoding
type: Class
subclass of: Compression or encoding
definition: Combination of forms of data compression and/or binary-to-text encoding is a sequence of data compressions and encodings that decreases the data volume and encodes it in the desired format. The reverse sequence of compressions and encodings should be used to decompress and decode the data into its original form.
has_exact_synonym: Combined data compression and encoding method
has_exact_synonym: Sequence of forms of data compression and binary-to-text encoding
has_narrow_synonym: Compressed and encoded data format
has_obo_namespace: WSIO
id: WSIO_compression:016
in_subset: compressions
comment: In the specialised ontology concepts of 'Combination of compression and encoding', the forms of compression and encoding are listed in their names (terms) in the order of the compression/encoding sequence. The reverse sequence must be used for decompression/decoding.

Axiom
annotated source: Combination of compression and encoding
annotated property: definition
annotated target: Combination of forms of data compression and/or binary-to-text encoding is a sequence of data compressions and encodings that decreases the data volume and encodes it in the desired format. The reverse sequence of compressions and encodings should be used to decompress and decode the data into its original form.
database_cross_reference: http://wsio.org

Axiom
annotated source: Combination of compression and encoding
annotated property: has_exact_synonym
annotated target: Combined data compression and encoding method
database_cross_reference: http://wsio.org
note: However, one should note that 'Combination of compression and encoding' is not limited only to explicit combined methods or algorithms.

Axiom
annotated source: Combination of compression and encoding
annotated property: has_exact_synonym
annotated target: Sequence of forms of data compression and binary-to-text encoding
database_cross_reference: http://wsio.org

Axiom
annotated source: Combination of compression and encoding
annotated property: has_narrow_synonym
annotated target: Compressed and encoded data format
database_cross_reference: http://wsio.org
note: The same concept in the case when 'Combination of compression and encoding' is used in a role of semantically annotating compressed and encoded data entities.

ZIP
type: Class
subclass of: Data compression
definition: ZIP is a compressed and archived data format, and a compression and archiving method, supported by multiple tools and systems.
has_broad_synonym: Binary format
database_cross_reference: http://en.wikipedia.org/wiki/ZIP_file_format
has_obo_namespace: WSIO
id: WSIO_compression:017
in_subset: compressions

Axiom
annotated source: ZIP
annotated property: definition
annotated target: ZIP is a compressed and archived data format, and a compression and archiving method, supported by multiple tools and systems.
database_cross_reference: http://wsio.org

Axiom
annotated source: ZIP
annotated property: has_broad_synonym
annotated target: Binary format
database_cross_reference: http://edamontology.org/format_2333

gzip
type: Class
subclass of: Data compression
definition: gzip (GNU zip) is a compression method supported by multiple tools and systems. It has a corresponding gzip data format.
database_cross_reference: http://en.wikipedia.org/wiki/Gzip
has_obo_namespace: WSIO
id: WSIO_compression:018
in_subset: compressions

Axiom
annotated source: gzip
annotated property: definition
annotated target: gzip (GNU zip) is a compression method supported by multiple tools and systems. It has a corresponding gzip data format.
database_cross_reference: http://wsio.org

tar gzip
type: Class
subclass of: Data compression
definition: tar archive (tape archive) compressed by gzip.
has_obo_namespace: WSIO
has_related_synonym: gzip
has_related_synonym: tar (file format)
id: WSIO_compression:019
in_subset: compressions

Axiom
annotated source: tar gzip
annotated property: has_related_synonym
annotated target: tar (file format)
database_cross_reference: http://en.wikipedia.org/wiki/Tar_(file_format)

Axiom
annotated source: tar gzip
annotated property: definition
annotated target: tar archive (tape archive) compressed by gzip.
database_cross_reference: http://wsio.org

Axiom
annotated source: tar gzip
annotated property: has_related_synonym
annotated target: gzip
database_cross_reference: http://en.wikipedia.org/wiki/Gzip

EXI
type: Class
subclass of: Data compression
definition: Efficient XML Interchange (EXI) is a compressed binary data format and a form of compression of XML-formatted data.
database_cross_reference: http://www.w3.org/TR/exi
has_obo_namespace: WSIO
id: WSIO_compression:020
in_subset: compressions

Axiom
annotated source: EXI
annotated property: definition
annotated target: Efficient XML Interchange (EXI) is a compressed binary data format and a form of compression of XML-formatted data.
database_cross_reference: http://wsio.org

base64
type: Class
subclass of: Binary-to-text encoding
definition: base64 is a form of representing binary data in text format.
database_cross_reference: http://en.wikipedia.org/wiki/Base64
has_obo_namespace: WSIO
id: WSIO_compression:021
in_subset: compressions

Axiom
annotated source: base64
annotated property: definition
annotated target: base64 is a form of representing binary data in text format.
database_cross_reference: http://wsio.org

gzip base64
type: Class
subclass of: Combination of compression and encoding
definition: 'gzip base64' combines compression by gzip followed by base64 encoding.
has_obo_namespace: WSIO
id: WSIO_compression:022
in_subset: compressions

Axiom
annotated source: gzip base64
annotated property: definition
annotated target: 'gzip base64' combines compression by gzip followed by base64 encoding.
database_cross_reference: http://wsio.org

7z
type: Class
subclass of: Data compression
definition: 7z is a compressed data format supporting multiple algorithms.
has_obo_namespace: WSIO
id: WSIO_compression:031
in_subset: compressions

Axiom
annotated source: 7z
annotated property: definition
annotated target: 7z is a compressed data format supporting multiple algorithms.
database_cross_reference: http://wsio.org

Data
type: Class
definition: Data is an information artefact that is 'understandable' by dedicated computational tools that can use the data as input or produce as output.
has_broad_synonym: continuant
database_cross_reference: http://edamontology.org/data_0006
has_obo_namespace: WSIO
has_related_synonym: data item
has_related_synonym: information content entity
in_subset: data
comment: A top-level concept in WSIO rooting the 'Data' sub-ontology. WSIO 'Data' sub-ontology includes types of data that are relevant with respect to interaction scenarios with Web services, including session handling (for example 'explicit polling' within asynchronous invocation). Concepts of WSIO 'Data' sub-ontology are applicable also outside of the context of Web-service interaction.

Axiom
annotated source: Data
annotated property: definition
annotated target: Data is an information artefact that is 'understandable' by dedicated computational tools that can use the data as input or produce as output.
database_cross_reference: http://wsio.org

Axiom
annotated source: Data
annotated property: has_broad_synonym
annotated target: continuant
database_cross_reference: snap:Continuant

Axiom
annotated source: Data
annotated property: has_related_synonym
annotated target: data item
database_cross_reference: http://purl.obolibrary.org/obo/IAO_0000027
note: IAO 'data item' is a closely related ontological category (concept) broader in the sense of being any type of data in any role, and narrower in the sense of being limited to a 'generically_dependent_continuant' (snap:GenericallyDependentContinuant), standing in relation of aboutness to some entity (http://purl.obolibrary.org/obo/IAO_0000030), and to data that is intended to be a truthful statement about something.

Axiom
annotated source: Data
annotated property: has_related_synonym
annotated target: information content entity
database_cross_reference: http://purl.obolibrary.org/obo/IAO_0000030
note: IAO 'information content entity' is a closely related ontological category (concept) broader in the sense of covering any type of data in any role, and narrower in the sense of being limited to a 'generically_dependent_continuant' (snap:GenericallyDependentContinuant) and standing in relation of aboutness to some entity.

Identifier
type: Class
subclass of: Data
definition: Identifier is a datum uniquely identifying an entity.
database_cross_reference: http://edamontology.org/data_0842
has_exact_synonym: ID
has_obo_namespace: WSIO
in_subset: data

Axiom
annotated source: Identifier
annotated property: definition
annotated target: Identifier is a datum uniquely identifying an entity.
database_cross_reference: http://wsio.org

Axiom
annotated source: Identifier
annotated property: has_exact_synonym
annotated target: ID
database_cross_reference: http://wsio.org

Job ID
type: Class
subclass of: Identifier
definition: Computation ID is a unique identifier of a computation process instance, that is used by the infrastructure responsible for the computation.
has_exact_synonym: Computation ID
has_obo_namespace: WSIO
in_subset: data
in_subset: supportedByEsysbio

Axiom
annotated source: Job ID
annotated property: definition
annotated target: Computation ID is a unique identifier of a computation process instance, that is used by the infrastructure responsible for the computation.
database_cross_reference: http://wsio.org

Axiom
annotated source: Job ID
annotated property: has_exact_synonym
annotated target: Computation ID
database_cross_reference: http://wsio.org

Status
type: Class
subclass of: Data
definition: Session status is a datum describing a state of a session.
has_narrow_synonym: Computation status
has_narrow_synonym: Job status
has_narrow_synonym: Session status
has_obo_namespace: WSIO
in_subset: data
in_subset: supportedByEsysbio

Axiom
annotated source: Status
annotated property: definition
annotated target: Session status is a datum describing a state of a session.
database_cross_reference: http://wsio.org

Axiom
annotated source: Status
annotated property: has_narrow_synonym
annotated target: Computation status
database_cross_reference: http://wsio.org

Axiom
annotated source: Status
annotated property: has_narrow_synonym
annotated target: Job status
database_cross_reference: http://wsio.org

Axiom
annotated source: Status
annotated property: has_narrow_synonym
annotated target: Session status
database_cross_reference: http://wsio.org

Result
type: Class
subclass of: Data
definition: Result is a datum (output argument) holding the result of a computation, or the actual (full, partial, or a part of) resulting data of a computation.
has_exact_synonym: Computation result
has_obo_namespace: WSIO
in_subset: data

Axiom
annotated source: Result
annotated property: definition
annotated target: Result is a datum (output argument) holding the result of a computation, or the actual (full, partial, or a part of) resulting data of a computation.
database_cross_reference: http://wsio.org

Axiom
annotated source: Result
annotated property: has_exact_synonym
annotated target: Computation result
database_cross_reference: http://wsio.org

Job in progress
type: Class
subclass of: Status
definition: TODO.
has_obo_namespace: WSIO
in_subset: data
in_subset: supportedByEsysbio

Axiom
annotated source: Job in progress
annotated property: definition
annotated target: TODO.
database_cross_reference: http://wsio.org

Job completed
type: Class
subclass of: Status
definition: TODO.
has_obo_namespace: WSIO
in_subset: data
in_subset: supportedByEsysbio

Axiom
annotated source: Job completed
annotated property: definition
annotated target: TODO.
database_cross_reference: http://wsio.org

Job aborted
type: Class
subclass of: Status
definition: TODO.
has_obo_namespace: WSIO
in_subset: data
in_subset: supportedByEsysbio

Axiom
annotated source: Job aborted
annotated property: definition
annotated target: TODO.
database_cross_reference: http://wsio.org

Job progress (in percent)
type: Class
subclass of: Status
definition: TODO.
has_obo_namespace: WSIO
in_subset: data
in_subset: supportedByEsysbio

Axiom
annotated source: Job progress (in percent)
annotated property: definition
annotated target: TODO.
database_cross_reference: http://wsio.org

Operation
type: Class
definition: Operation is a function that processes a set of inputs and results in a set of outputs, or associates arguments (inputs) with values (outputs).
has_broad_synonym: Function
has_broad_synonym: continuant
database_cross_reference: http://edamontology.org/operation_0004
has_narrow_synonym: Computational method
has_narrow_synonym: Computational operation
has_narrow_synonym: Computational procedure
has_narrow_synonym: Computational subroutine
has_narrow_synonym: Function (mathematics)
has_narrow_synonym: Function (programming)
has_narrow_synonym: Lambda abstraction
has_narrow_synonym: Mathematical function
has_narrow_synonym: Mathematical operation
has_narrow_synonym: Subroutine
has_obo_namespace: WSIO
has_related_synonym: Process
has_related_synonym: function
has_related_synonym: process
has_related_synonym: quality
id: WSIO_operation:001
in_subset: operations
comment: A singular case is a constant operation (constant function) that consumes no input (has no input arguments). A top-level concept in WSIO rooting the 'Operation' sub-ontology. WSIO 'Operation' sub-ontology includes operations that are relevant with respect to interaction scenarios with Web services, including session handling (for example 'explicit polling' within asynchronous invocation). Some concepts of WSIO 'Operation' sub-ontology are applicable also outside of the context of Web-service interaction.

Axiom
annotated source: Operation
annotated property: definition
annotated target: Operation is a function that processes a set of inputs and results in a set of outputs, or associates arguments (inputs) with values (outputs).
database_cross_reference: http://wsio.org

Axiom
annotated source: Operation
annotated property: has_broad_synonym
annotated target: Function
database_cross_reference: http://wsio.org
note: Operation is a function that has input(s) and output(s).

Axiom
annotated source: Operation
annotated property: has_broad_synonym
annotated target: continuant
database_cross_reference: snap:Continuant

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Computational method
database_cross_reference: http://wsio.org

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Computational operation
database_cross_reference: http://wsio.org

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Computational procedure
database_cross_reference: http://wsio.org

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Computational subroutine
database_cross_reference: http://wsio.org

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Function (mathematics)
database_cross_reference: http://en.wikipedia.org/wiki/Function_(mathematics)

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Function (programming)
database_cross_reference: http://wsio.org

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Lambda abstraction
database_cross_reference: http://wsio.org

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Mathematical function
database_cross_reference: http://wsio.org

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Mathematical operation
database_cross_reference: http://wsio.org

Axiom
annotated source: Operation
annotated property: has_narrow_synonym
annotated target: Subroutine
database_cross_reference: http://en.wikipedia.org/wiki/Function_(computer_science)
database_cross_reference: http://en.wikipedia.org/wiki/Subroutine

Axiom
annotated source: Operation
annotated property: has_related_synonym
annotated target: Process
database_cross_reference: http://wsio.org
note: Process can have a function (as its quality/attribute), and can also have (perform) an 'Operation' with inputs and outputs.

Axiom
annotated source: Operation
annotated property: has_related_synonym
annotated target: function
database_cross_reference: snap:Function
note: BFO 'function' is narrower in the sense that it is a 'realizable_entity' (snap:RealizableEntity) and a 'dependent_continuant' (snap:DependentContinuant), and broader in the sense that it does not need to have input(s) and output(s).

Axiom
annotated source: Operation
annotated property: has_related_synonym
annotated target: process
database_cross_reference: span:Process
note: Process can have a function (as its quality/attribute), and can also have (perform) an 'Operation' with inputs and outputs.

Axiom
annotated source: Operation
annotated property: has_related_synonym
annotated target: quality
database_cross_reference: snap:Quality
note: Function, including an operation, can have a role of a quality/attribute in semantic annotation.

Job submission
type: Class
subclass of: Operation
definition: 'Submit job' is an operation that submits a new computational task.
has_exact_synonym: Job submission
has_obo_namespace: WSIO
id: WSIO_operation:006
in_subset: operations
in_subset: supportedByEsysbio

Axiom
annotated source: Job submission
annotated property: definition
annotated target: 'Submit job' is an operation that submits a new computational task.
database_cross_reference: http://wsio.org

Axiom
annotated source: Job submission
annotated property: has_exact_synonym
annotated target: Job submission
database_cross_reference: http://wsio.org

Status retrieval
type: Class
subclass of: Operation
subclass of: Restriction
  on property: has input
  some values from: Job ID
subclass of: Restriction
  on property: has output
  some values from: Status
definition: 'Get status' is an operation that returns a status of a session or a computation.
has_exact_synonym: Get session status
has_exact_synonym: Query status
has_narrow_synonym: Get computation status
has_narrow_synonym: Get job status
has_obo_namespace: WSIO
id: WSIO_operation:007
in_subset: operations
in_subset: supportedByEsysbio

Axiom
annotated source: Status retrieval
annotated property: definition
annotated target: 'Get status' is an operation that returns a status of a session or a computation.
database_cross_reference: http://wsio.org

Axiom
annotated source: Status retrieval
annotated property: has_exact_synonym
annotated target: Get session status
database_cross_reference: http://wsio.org

Axiom
annotated source: Status retrieval
annotated property: has_exact_synonym
annotated target: Query status
database_cross_reference: http://wsio.org

Axiom
annotated source: Status retrieval
annotated property: has_narrow_synonym
annotated target: Get computation status
database_cross_reference: http://wsio.org

Axiom
annotated source: Status retrieval
annotated property: has_narrow_synonym
annotated target: Get job status
database_cross_reference: http://wsio.org

Result retrieval
type: Class
subclass of: Operation
subclass of: Restriction
  on property: has input
  some values from: Job ID
subclass of: Restriction
  on property: has output
  some values from: Result
definition: 'Get result' is an operation that returns a result of a computation.
has_exact_synonym: Fetch result
has_exact_synonym: Get results
has_obo_namespace: WSIO
id: WSIO_operation:008
in_subset: operations
in_subset: supportedByEsysbio

Axiom
annotated source: Result retrieval
annotated property: definition
annotated target: 'Get result' is an operation that returns a result of a computation.
database_cross_reference: http://wsio.org

Axiom
annotated source: Result retrieval
annotated property: has_exact_synonym
annotated target: Fetch result
database_cross_reference: http://wsio.org

Axiom
annotated source: Result retrieval
annotated property: has_exact_synonym
annotated target: Get results
database_cross_reference: http://wsio.org

Init session
type: Class
subclass of: Operation
subclass of: Restriction
  on property: has output
  some values from: Job ID
definition: 'Init session' is an operation that starts a new session.
has_exact_synonym: Open session
has_exact_synonym: Start new session
has_obo_namespace: WSIO
id: WSIO_operation:023
in_subset: operations
in_subset: supportedByEsysbio

Axiom
annotated source: Init session
annotated property: definition
annotated target: 'Init session' is an operation that starts a new session.
database_cross_reference: http://wsio.org

Axiom
annotated source: Init session
annotated property: has_exact_synonym
annotated target: Open session
database_cross_reference: http://wsio.org

Axiom
annotated source: Init session
annotated property: has_exact_synonym
annotated target: Start new session
database_cross_reference: http://wsio.org

Send data
type: Class
subclass of: Operation
definition: 'Send data' is an operation that sends or sets the payload input data for a computation.
has_broad_synonym: Send input
has_exact_synonym: Send payload input data
has_exact_synonym: Set data
has_obo_namespace: WSIO
id: WSIO_operation:024
in_subset: operations
in_subset: supportedByEsysbio

Axiom
annotated source: Send data
annotated property: definition
annotated target: 'Send data' is an operation that sends or sets the payload input data for a computation.
database_cross_reference: http://wsio.org

Axiom
annotated source: Send data
annotated property: has_broad_synonym
annotated target: Send input
database_cross_reference: http://wsio.org

Axiom
annotated source: Send data
annotated property: has_exact_synonym
annotated target: Send payload input data
database_cross_reference: http://wsio.org

Axiom
annotated source: Send data
annotated property: has_exact_synonym
annotated target: Set data
database_cross_reference: http://wsio.org

Set parameters
type: Class
subclass of: Operation
definition: 'Set parameters' is an operation that sets the (input) parameters of a parameterised computation.
has_broad_synonym: Send input
has_exact_synonym: Send parameters
has_obo_namespace: WSIO
id: WSIO_operation:025
in_subset: operations
in_subset: supportedByEsysbio

Axiom
annotated source: Set parameters
annotated property: definition
annotated target: 'Set parameters' is an operation that sets the (input) parameters of a parameterised computation.
database_cross_reference: http://wsio.org

Axiom
annotated source: Set parameters
annotated property: has_broad_synonym
annotated target: Send input
database_cross_reference: http://wsio.org

Axiom
annotated source: Set parameters
annotated property: has_exact_synonym
annotated target: Send parameters
database_cross_reference: http://wsio.org

Transfer
type: Class
definition: Transfer (type of data transfer, data transfer protocol) is the way data is transfered between 2 locations or processes.
has_broad_synonym: continuant
has_exact_synonym: Data channel
has_exact_synonym: Data transfer
has_exact_synonym: Data transfer protocol
has_exact_synonym: Form of data transfer
has_exact_synonym: Type of data transfer
has_obo_namespace: WSIO
has_related_synonym: Function
has_related_synonym: Process
has_related_synonym: function
has_related_synonym: process
has_related_synonym: quality
id: WSIO_transfer:003
in_subset: transfers
comment: Types of transfer are not bound to any particular layer of the OSI Model (http://en.wikipedia.org/wiki/OSI_model). A top-level concept in WSIO rooting the 'Transfer' sub-ontology. WSIO 'Transfer' sub-ontology includes forms of transfer and transfer protocols that are relevant with respect to transferring input and output data to and from Web services. Some concepts of WSIO 'Transfer' sub-ontology are applicable also outside of the context of Web-service interaction.

Axiom
annotated source: Transfer
annotated property: definition
annotated target: Transfer (type of data transfer, data transfer protocol) is the way data is transfered between 2 locations or processes.
database_cross_reference: http://wsio.org

Axiom
annotated source: Transfer
annotated property: has_broad_synonym
annotated target: continuant
database_cross_reference: snap:Continuant

Axiom
annotated source: Transfer
annotated property: has_exact_synonym
annotated target: Data channel
database_cross_reference: http://wsio.org

Axiom
annotated source: Transfer
annotated property: has_exact_synonym
annotated target: Data transfer
database_cross_reference: http://wsio.org

Axiom
annotated source: Transfer
annotated property: has_exact_synonym
annotated target: Data transfer protocol
database_cross_reference: http://wsio.org

Axiom
annotated source: Transfer
annotated property: has_exact_synonym
annotated target: Form of data transfer
database_cross_reference: http://wsio.org

Axiom
annotated source: Transfer
annotated property: has_exact_synonym
annotated target: Type of data transfer
database_cross_reference: http://wsio.org

Axiom
annotated source: Transfer
annotated property: has_related_synonym
annotated target: Function
database_cross_reference: http://wsio.org
note: Form of data transfer is related to a function of transferring data.

Axiom
annotated source: Transfer
annotated property: has_related_synonym
annotated target: Process
database_cross_reference: http://wsio.org
note: Form of data transfer is related to a process of transferring data.

Axiom
annotated source: Transfer
annotated property: has_related_synonym
annotated target: function
database_cross_reference: snap:Function
note: Form of data transfer is related to a function of transferring data.

Axiom
annotated source: Transfer
annotated property: has_related_synonym
annotated target: process
database_cross_reference: span:Process
note: Form of data transfer is related to a process of transferring data.

Axiom
annotated source: Transfer
annotated property: has_related_synonym
annotated target: quality
database_cross_reference: snap:Quality
note: BFO 'quality' is narrower in the sense that it is a 'dependent_continuant' (snap:DependentContinuant), and broader in the sense that it is any quality not just the form of data transfer.

In SOAP body
type: Class
subclass of: Transfer
definition: 'In SOAP body' is a form of data transfer inside the body of a SOAP message.
has_exact_synonym: In-line
has_exact_synonym: SOAP
has_obo_namespace: WSIO
id: WSIO_transfer:011
in_subset: supportedByEsysbio
in_subset: transfers

Axiom
annotated source: In SOAP body
annotated property: definition
annotated target: 'In SOAP body' is a form of data transfer inside the body of a SOAP message.
database_cross_reference: http://wsio.org

Axiom
annotated source: In SOAP body
annotated property: has_exact_synonym
annotated target: In-line
database_cross_reference: http://wsio.org

Axiom
annotated source: In SOAP body
annotated property: has_exact_synonym
annotated target: SOAP
database_cross_reference: http://wsio.org

MTOM
type: Class
subclass of: Transfer
definition: MTOM is a form of data transfer as an MTOM attachment of a SOAP message.
has_obo_namespace: WSIO
id: WSIO_transfer:012
in_subset: supportedByEsysbio
in_subset: transfers

Axiom
annotated source: MTOM
annotated property: definition
annotated target: MTOM is a form of data transfer as an MTOM attachment of a SOAP message.
database_cross_reference: http://wsio.org

Download from URL
type: Class
subclass of: Transfer
definition: 'Download from URL' is a form of data transfer by downloading from a specified URL.
has_obo_namespace: WSIO
id: WSIO_transfer:013
in_subset: supportedByEsysbio
in_subset: transfers
comment: Within the semantic annotation of forms of transfer of Web services or other tools, the data (argument) holding the specified URL should be annotated as having transfer 'Download from URL'.

Axiom
annotated source: Download from URL
annotated property: definition
annotated target: 'Download from URL' is a form of data transfer by downloading from a specified URL.
database_cross_reference: http://wsio.org