TEMP.owl
type: Ontology
auto-generated-by: OBO-Edit 2.3.1
date: 29:03:2018 15:54
default-namespace: solanaceae_phenotype
has_obo_format_version: 1.2
saved-by: naama

definition
type: AnnotationProperty

has_alternative_id
type: AnnotationProperty

database_cross_reference
type: AnnotationProperty

has_exact_synonym
type: AnnotationProperty

has_obo_format_version
type: AnnotationProperty

has_obo_namespace
type: AnnotationProperty

has_related_synonym
type: AnnotationProperty

attribute_of
type: ObjectProperty
has_obo_namespace: solanaceae_phenotype
id: attribute_of

part of
type: ObjectProperty
has_obo_namespace: solanaceae_phenotype
id: part_of

variable_of
type: ObjectProperty
has_obo_namespace: solanaceae_phenotype
id: variable_of

placenta color
type: Class
subclass of: fruit color
definition: The color of the placenta.
database_cross_reference: PATO:0000014
has_obo_namespace: solanaceae_phenotype
id: SP:0000000

Axiom
annotated source: placenta color
annotated property: definition
annotated target: The color of the placenta.
database_cross_reference: SGN:NM

seedling
type: Class
subclass of: whole plant phenotype
database_cross_reference: PO:0007057
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000620
id: SP:0000001

plant size
type: Class
subclass of: whole plant phenotype
database_cross_reference: PATO:0000117
database_cross_reference: PO:0000003
database_cross_reference: PO:0007130
database_cross_reference: TO:0000207
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000207
id: SP:0000002

plant habit
type: Class
subclass of: whole plant phenotype
database_cross_reference: PO:0007134
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000357
id: SP:0000003

leaf morphology
type: Class
subclass of: leaf
database_cross_reference: PATO:0000051
database_cross_reference: PO:0001050
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000419
id: SP:0000004

leaf color
type: Class
subclass of: leaf
database_cross_reference: PATO:0000014
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000326
id: SP:0000005

flowering
type: Class
subclass of: Solanaceae phenotype ontology
definition: Traits and phenotypes related to flowering.
database_cross_reference: PO:0007016
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000006

inflorescence
type: Class
subclass of: Restriction
  on property: part of
  some values from: shoot phenotype
database_cross_reference: PO:0001083
database_cross_reference: PO:0009049
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000373
id: SP:0000007

flower morphology
type: Class
subclass of: Restriction
  on property: part of
  some values from: flower
database_cross_reference: PATO:0000051
database_cross_reference: PO:0007615
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000499
id: SP:0000008

flower color
type: Class
subclass of: Restriction
  on property: part of
  some values from: flower
database_cross_reference: PATO:0000014
database_cross_reference: PO:0007600
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000537
id: SP:0000009

fruit size
type: Class
subclass of: fruit morphology
database_cross_reference: PATO:0000117
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000010

fruit morphology
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit
database_cross_reference: PATO:0000051
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000011

fruit color
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit
database_cross_reference: PATO:0000014
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000012

fruit ripening
type: Class
subclass of: fruit
definition: Fruit ripening process.
database_cross_reference: PO:0007010
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000013

Axiom
annotated source: fruit ripening
annotated property: definition
annotated target: Fruit ripening process.
database_cross_reference: SGN:NM

sterility
type: Class
subclass of: Solanaceae phenotype ontology
database_cross_reference: PO:0007616
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000485
id: SP:0000014

disease and stress response
type: Class
subclass of: whole plant phenotype
database_cross_reference: PO:0000003
database_cross_reference: PO:0007130
database_cross_reference: PO:0007134
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000063
id: SP:0000015

anthocyanin content
type: Class
subclass of: biochemical metabolites
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000071
id: SP:0000016

chlorophyll content
type: Class
subclass of: biochemical metabolites
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000495
id: SP:0000017

hair modifications
type: Class
subclass of: Solanaceae phenotype ontology
database_cross_reference: PO:0000282
has_obo_namespace: solanaceae_phenotype
has_related_synonym: trichomes
id: SP:0000018

biochemical metabolites
type: Class
subclass of: Solanaceae phenotype ontology
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000277
id: SP:0000019

root modifications
type: Class
subclass of: Solanaceae phenotype ontology
database_cross_reference: PO:0007520
database_cross_reference: PO:0009005
has_obo_namespace: solanaceae_phenotype
id: SP:0000020

extremely small plant
type: Class
subclass of: qualitative plant size
database_cross_reference: PATO:0000969
database_cross_reference: PO:0000003
database_cross_reference: PO:0007130
database_cross_reference: PO:0007134
has_obo_namespace: solanaceae_phenotype
id: SP:0000021

small plant
type: Class
subclass of: qualitative plant size
database_cross_reference: PATO:0000587
database_cross_reference: PO:0000003
database_cross_reference: PO:0007130
database_cross_reference: PO:0007134
has_obo_namespace: solanaceae_phenotype
id: SP:0000022

large plant
type: Class
subclass of: qualitative plant size
database_cross_reference: PATO:0000586
database_cross_reference: PO:0000003
database_cross_reference: PO:0007130
database_cross_reference: PO:0007134
has_obo_namespace: solanaceae_phenotype
id: SP:0000023

seed morphology
type: Class
subclass of: seed
database_cross_reference: PATO:0000051
database_cross_reference: PO:0001170
database_cross_reference: PO:0009010
has_obo_namespace: solanaceae_phenotype
id: SP:0000024

nutritional or hormonal disorder
type: Class
subclass of: Solanaceae phenotype ontology
has_obo_namespace: solanaceae_phenotype
id: SP:0000025

virescent leaf
type: Class
subclass of: yellow-green leaf
definition: Chlorophyll deficiency localized at growing point.
database_cross_reference: PATO:0001941
database_cross_reference: PO:0001050
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
id: SP:0000026

Axiom
annotated source: virescent leaf
annotated property: definition
annotated target: Chlorophyll deficiency localized at growing point.
database_cross_reference: TGRC:F

disease resistance
type: Class
subclass of: disease and stress response
database_cross_reference: PO:0000003
database_cross_reference: PO:0007130
database_cross_reference: PO:0007134
has_obo_namespace: solanaceae_phenotype
id: SP:0000027

brown green leaf color
type: Class
subclass of: leaf color phenotypic values
definition: Olive, brown, blue-green leaf.
database_cross_reference: PATO:0001942
database_cross_reference: PO:0001050
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
id: SP:0000028

Axiom
annotated source: brown green leaf color
annotated property: definition
annotated target: Olive, brown, blue-green leaf.
database_cross_reference: TGRC:U

allozyme variant
type: Class
subclass of: Solanaceae phenotype ontology
has_obo_namespace: solanaceae_phenotype
id: SP:0000029

vascular tissue
type: Class
subclass of: Solanaceae phenotype ontology
has_obo_namespace: solanaceae_phenotype
id: SP:0000030

internode length
type: Class
subclass of: plant habit
database_cross_reference: PATO:0000122
database_cross_reference: PO:0007089
database_cross_reference: PO:0020142
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000145
id: SP:0000031

branching
type: Class
subclass of: plant habit
database_cross_reference: PO:0006343
database_cross_reference: PO:0007073
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000361
id: SP:0000032

aborted growth
type: Class
subclass of: plant habit
database_cross_reference: PATO:0000297
database_cross_reference: PO:0007112
database_cross_reference: PO:0009006
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000195
id: SP:0000033

other plant habit
type: Class
definition: OBSOLETE. Use parent term instead SP:0000003.
database_cross_reference: PO:0007134
has_obo_namespace: solanaceae_phenotype
id: SP:0000034
deprecated: true

Axiom
annotated source: other plant habit
annotated property: definition
annotated target: OBSOLETE. Use parent term instead SP:0000003.
database_cross_reference: SGN:NM

nutritional disorder
type: Class
subclass of: biochemical metabolites
has_obo_namespace: solanaceae_phenotype
id: SP:0000035

hormonal disorder
type: Class
subclass of: biochemical metabolites
has_obo_namespace: solanaceae_phenotype
id: SP:0000036

fruit
type: Class
subclass of: Solanaceae phenotype ontology
definition: Fruit related traits and phenotypes.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000037

Axiom
annotated source: fruit
annotated property: definition
annotated target: Fruit related traits and phenotypes.
database_cross_reference: SP:NM

fruit shape
type: Class
subclass of: fruit morphology
definition: The shape of a fruit.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000038

Axiom
annotated source: fruit shape
annotated property: definition
annotated target: The shape of a fruit.
database_cross_reference: SGN:NM

fruit shape index
type: Class
subclass of: fruit shape
definition: Shape ratio.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000039

Axiom
annotated source: fruit shape index
annotated property: definition
annotated target: Shape ratio.
database_cross_reference: SGN:EVDK

fruit shape index external 1
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape index
definition: The ratio of the maximum fruit height to maximum fruit width.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: fruit shape index 1
id: SP:0000040

Axiom
annotated source: fruit shape index external 1
annotated property: definition
annotated target: The ratio of the maximum fruit height to maximum fruit width.
database_cross_reference: SGN:EVDK

leaf width
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf size
definition: Leaf width in cm.
database_cross_reference: PATO:0000921
database_cross_reference: PO:0001052
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000370
id: SP:0000041

Axiom
annotated source: leaf width
annotated property: definition
annotated target: Leaf width in cm.
database_cross_reference: SGN:EVDK

leaf size
type: Class
subclass of: leaf morphology
database_cross_reference: PATO:0000117
database_cross_reference: PO:0001052
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000542
id: SP:0000042

SP_0000043
type: Class
IAO_0000231: IAO_0000227
IAO_0100001: leaf complexity
deprecated: true

leaf texture
type: Class
subclass of: leaf morphology
database_cross_reference: PATO:0000150
database_cross_reference: PO:0001050
database_cross_reference: PO:0006016
has_obo_namespace: solanaceae_phenotype
id: SP:0000044

leaf complexity
type: Class
subclass of: leaf morphology
has_alternative_id: SP:0000043
database_cross_reference: PATO:0001502
database_cross_reference: PO:0001050
database_cross_reference: PO:0009025
has_exact_synonym: leaf complexity
has_obo_namespace: solanaceae_phenotype
id: SP:0000045

fruit shape index external 2
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape index
definition: The ratio of fruit height mid-width to fruit width mid-height.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: fruit shape index 2
id: SP:0000046

Axiom
annotated source: fruit shape index external 2
annotated property: definition
annotated target: The ratio of fruit height mid-width to fruit width mid-height.
database_cross_reference: SGN:EVDK

tuber
type: Class
subclass of: shoot phenotype
definition: Swollen storage shoot with determinate growth.
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000047

Axiom
annotated source: tuber
annotated property: definition
annotated target: Swollen storage shoot with determinate growth.
database_cross_reference: POC:curators

subterranean tuber
type: Axiom
annotated source: tuber
annotated property: database_cross_reference
annotated target: PO:0004547

shape index internal
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape index
definition: Internal ellipse height/width ratio.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: pei
has_related_synonym: pericarp elongation index
id: SP:0000048

Axiom
annotated source: shape index internal
annotated property: definition
annotated target: Internal ellipse height/width ratio.
database_cross_reference: SGN:EVDK

fruit shape triangle
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape
definition: Proximal/distal width ratio. The ratio of the width at fruit proximal end to the width at the fruit distal end.
database_cross_reference: PATO:0001875
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: tri
id: SP:0000049

Axiom
annotated source: fruit shape triangle
annotated property: definition
annotated target: Proximal/distal width ratio. The ratio of the width at fruit proximal end to the width at the fruit distal end.
database_cross_reference: SGN:EVDK

fruit shape circular
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape
definition: Fitting precision R2. How well the boundary of a perfect circle fits the boundary of a fruit. The ratio of the error resulting from a best-fit circle to the area of the fruit. Error is the average magnitude of residuals (Res) along the fruit perimeter, divided by the radius of the circle. Smaller values indicate that the fruit is more Circular.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: cir
id: SP:0000050

Axiom
annotated source: fruit shape circular
annotated property: definition
annotated target: Fitting precision R2. How well the boundary of a perfect circle fits the boundary of a fruit. The ratio of the error resulting from a best-fit circle to the area of the fruit. Error is the average magnitude of residuals (Res) along the fruit perimeter, divided by the radius of the circle. Smaller values indicate that the fruit is more Circular.
database_cross_reference: SGN:EVDK

purple leaf
type: Class
subclass of: leaf color phenotypic values
database_cross_reference: PATO:0000951
database_cross_reference: PO:0001050
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
id: SP:0000051

white leaf
type: Class
subclass of: leaf color phenotypic values
database_cross_reference: PATO:0000323
database_cross_reference: PO:0001050
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
id: SP:0000052

yellow leaf
type: Class
subclass of: leaf color phenotypic values
database_cross_reference: PATO:0000342
database_cross_reference: PO:0001050
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
id: SP:0000053

yellow-green leaf
type: Class
subclass of: leaf color phenotypic values
database_cross_reference: PATO:0001941
database_cross_reference: PO:0001050
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
id: SP:0000054

dull green/grey leaf
type: Class
subclass of: leaf color phenotypic values
database_cross_reference: PATO:0000950
database_cross_reference: PO:0001050
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
id: SP:0000055

dark green leaf
type: Class
subclass of: leaf color phenotypic values
database_cross_reference: PATO:0001249
database_cross_reference: PO:0001050
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
id: SP:0000056

leaf variegation
type: Class
subclass of: leaf color phenotypic values
database_cross_reference: PATO:0001533
database_cross_reference: PO:0001050
database_cross_reference: PO:0005645
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000069
id: SP:0000057

fruit shape eccentric
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape
definition: The asymmetry of the fruit. Height of internal ellipse / total height.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_exact_synonym: ecc
has_obo_namespace: solanaceae_phenotype
has_related_synonym: eccenticity
id: SP:0000058

Axiom
annotated source: fruit shape eccentric
annotated property: definition
annotated target: The asymmetry of the fruit. Height of internal ellipse / total height.
database_cross_reference: SGN:EVDK

obovoid
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape eccentric
definition: 1/2fOb(y) x Tob. The degree of pear-shapeness. If the area of the fruit is greater below mid-height than above it, then Obovoid is calculated from the maximum width (W), the height at which the maximum width occurs (y), the average width above that height (w1), and the average width below that height (w2), and a scaling function scale_ob as: Obovoid = 1/2 * scale_ob(y) * (1- w1/W + w2/W) If Obovoid > 0, subtract 0.4. Otherwise, Obovoid is 0.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: obo
has_related_synonym: obovate
has_related_synonym: pear shape
id: SP:0000059

Axiom
annotated source: obovoid
annotated property: definition
annotated target: 1/2fOb(y) x Tob. The degree of pear-shapeness. If the area of the fruit is greater below mid-height than above it, then Obovoid is calculated from the maximum width (W), the height at which the maximum width occurs (y), the average width above that height (w1), and the average width below that height (w2), and a scaling function scale_ob as: Obovoid = 1/2 * scale_ob(y) * (1- w1/W + w2/W) If Obovoid > 0, subtract 0.4. Otherwise, Obovoid is 0.
database_cross_reference: SGN:EVDK

ovoid
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape eccentric
definition: 1/2fOv(y) x Tov. The opposite of pear-shapeness. If the area of the fruit is greater above mid-height than below it, then Ovoid is calculated from the maximum width (W), the height at which the maximum width occurs (y), the average width above that height (w1), and the average width below that height (w2), and a scaling function scale_ov as:Ovoid = 1/2 *scale_ov(y) * (1 - w2/W + w1/W). If Ovoid > 0, subtract 0.4. Otherwise, Ovoid is 0.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: ovate
has_related_synonym: ovo
id: SP:0000060

Axiom
annotated source: ovoid
annotated property: definition
annotated target: 1/2fOv(y) x Tov. The opposite of pear-shapeness. If the area of the fruit is greater above mid-height than below it, then Ovoid is calculated from the maximum width (W), the height at which the maximum width occurs (y), the average width above that height (w1), and the average width below that height (w2), and a scaling function scale_ov as:Ovoid = 1/2 *scale_ov(y) * (1 - w2/W + w1/W). If Ovoid > 0, subtract 0.4. Otherwise, Ovoid is 0.
database_cross_reference: SGN:EVDK

flowering timing
type: Class
subclass of: Restriction
  on property: part of
  some values from: flowering
database_cross_reference: PATO:0000165
database_cross_reference: PO:0007016
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000344
has_related_synonym: TO:0000366
id: SP:0000061

heart shape degree. Calculation.
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape
definition: 0.25 x [1/2fOv(y) x Tov] + 20 x [(H_sl + H_sr)/2*H] the degree of heart shapeness.
database_cross_reference: PATO:0000948
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: hrt
id: SP:0000062

Axiom
annotated source: heart shape degree. Calculation.
annotated property: definition
annotated target: 0.25 x [1/2fOv(y) x Tov] + 20 x [(H_sl + H_sr)/2*H] the degree of heart shapeness.
database_cross_reference: SGN:EVDK

distal eccentricity index
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape eccentric
definition: Internal ellipse height / height top ellipse-bottom fruit ratio.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: dec
id: SP:0000063

Axiom
annotated source: distal eccentricity index
annotated property: definition
annotated target: Internal ellipse height / height top ellipse-bottom fruit ratio.
database_cross_reference: SGN:EVDK

proximal eccentricity index
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape eccentric
definition: internal ellipse height/height bottom ellipse-top fruit ratio .
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: pec
id: SP:0000064

Axiom
annotated source: proximal eccentricity index
annotated property: definition
annotated target: internal ellipse height/height bottom ellipse-top fruit ratio .
database_cross_reference: SGN:EVDK

horizontal asymmetry
type: Class
subclass of: fruit shape eccentric
definition: [sum|n-ny|]/L. Degree of horizontal asymmetry .
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: hor
id: SP:0000065

Axiom
annotated source: horizontal asymmetry
annotated property: definition
annotated target: [sum|n-ny|]/L. Degree of horizontal asymmetry .
database_cross_reference: SGN:EVDK

vertical asymmetry
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape eccentric
definition: [sum|m-mi|]/L. Degree of vertical asymmetry. The average distance (Res_w) between a vertical line through the fruit at mid-width and the midpoint of the fruit width at each height.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: ver
id: SP:0000066

Axiom
annotated source: vertical asymmetry
annotated property: definition
annotated target: [sum|m-mi|]/L. Degree of vertical asymmetry. The average distance (Res_w) between a vertical line through the fruit at mid-width and the midpoint of the fruit width at each height.
database_cross_reference: SGN:EVDK

fruit shape ellipsoid
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape
definition: Fitting precision R2. How well the boundary of a perfect ellipse fits the boundary of a fruit. The ratio of the error resulting from a best-fit ellipse to the area of the fruit. Error is the average magnitude of residuals (Res) along the fruit perimeter, divided by the length of the major (longer) axis of the ellipse. Smaller values indicate that the fruit is more ellipsoid.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: ell
id: SP:0000067

Axiom
annotated source: fruit shape ellipsoid
annotated property: definition
annotated target: Fitting precision R2. How well the boundary of a perfect ellipse fits the boundary of a fruit. The ratio of the error resulting from a best-fit ellipse to the area of the fruit. Error is the average magnitude of residuals (Res) along the fruit perimeter, divided by the length of the major (longer) axis of the ellipse. Smaller values indicate that the fruit is more ellipsoid.
database_cross_reference: SGN:EVDK

fruit shape rectangular
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape
definition: .The ratio of the area of the rectangle bounding the fruit to the area of the rectangle bounded by the fruit.
database_cross_reference: PATO:0001867
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: rec
id: SP:0000068

Axiom
annotated source: fruit shape rectangular
annotated property: definition
annotated target: .The ratio of the area of the rectangle bounding the fruit to the area of the rectangle bounded by the fruit.
database_cross_reference: PMID:16684933

fruit end
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit
definition: The ends of the fruit.
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000069

Axiom
annotated source: fruit end
annotated property: definition
annotated target: The ends of the fruit.
database_cross_reference: SGN:EVDK

distal fruit end shape
type: Class
subclass of: fruit shape
subclass of: distal fruit end
definition: The shape of the distal end of the fruit.
database_cross_reference: PATO:0000052
database_cross_reference: PATO:0001234
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: blossom end
id: SP:0000070

Axiom
annotated source: distal fruit end shape
annotated property: definition
annotated target: The shape of the distal end of the fruit.
database_cross_reference: SGN:EVDK

inflorescence structure
type: Class
subclass of: inflorescence
database_cross_reference: PATO:0000141
database_cross_reference: PO:0001083
database_cross_reference: PO:0009049
has_obo_namespace: solanaceae_phenotype
id: SP:0000071

proximal fruit end shape
type: Class
subclass of: fruit shape
subclass of: proximal fruit end
definition: The shape of the proximal end of the fruit.
database_cross_reference: PATO:0000052
database_cross_reference: PATO:0001195
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008002
has_obo_namespace: solanaceae_phenotype
has_related_synonym: stem end
id: SP:0000072

Axiom
annotated source: proximal fruit end shape
annotated property: definition
annotated target: The shape of the proximal end of the fruit.
database_cross_reference: SGN:EVDK

distal fruit end angle
type: Class
subclass of: distal fruit end shape
definition: Angle between intersection of two lines representing the slope at the fruit distal end.
database_cross_reference: PATO:0000133
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: dan
id: SP:0000073

Axiom
annotated source: distal fruit end angle
annotated property: definition
annotated target: Angle between intersection of two lines representing the slope at the fruit distal end.
database_cross_reference: SGN:evdk

proximal fruit end angle
type: Class
subclass of: proximal fruit end shape
definition: Angle between intersection of two lines representing the slope of the proximal fruit end.
database_cross_reference: PATO:0000133
database_cross_reference: PATO:0001195
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008002
has_obo_namespace: solanaceae_phenotype
has_related_synonym: pan
id: SP:0000074

Axiom
annotated source: proximal fruit end angle
annotated property: definition
annotated target: Angle between intersection of two lines representing the slope of the proximal fruit end.
database_cross_reference: SGN:EVDK

distal fruit end blockiness
type: Class
subclass of: Restriction
  on property: part of
  some values from: distal fruit end shape
definition: Distal fruit end width/mid width ratio. The ratio of the width at the distal fruit end to the mid-fruit width.
database_cross_reference: PATO:0001234
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: dblk
id: SP:0000075

Axiom
annotated source: distal fruit end blockiness
annotated property: definition
annotated target: Distal fruit end width/mid width ratio. The ratio of the width at the distal fruit end to the mid-fruit width.
database_cross_reference: SGN:EVDK

distal fruit end indentation
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end shape
definition: Fruit end indented area/total fruit area. The ratio of the area of the distal indentation (bounded by the distal protrusion points, D_sl and D_sr) to the total area of the fruit, multiplied by 10. T.A. version 3.0.
database_cross_reference: PATO:0001234
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: diar
id: SP:0000076

Axiom
annotated source: distal fruit end indentation
annotated property: definition
annotated target: Fruit end indented area/total fruit area. The ratio of the area of the distal indentation (bounded by the distal protrusion points, D_sl and D_sr) to the total area of the fruit, multiplied by 10. T.A. version 3.0.
database_cross_reference: SGN:EVDK

distal fruit end protrusion
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end shape
definition: Distal fruit end protruded area/total fruit area. The ratio of the area of the distal protrusion (bounded by the distal protrusion points, D_sl and D_sr) to the total area of the fruit, multiplied by 10. T.A. version 3.0 .
database_cross_reference: PATO:0001234
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: nipple tip
id: SP:0000077

Axiom
annotated source: distal fruit end protrusion
annotated property: definition
annotated target: Distal fruit end protruded area/total fruit area. The ratio of the area of the distal protrusion (bounded by the distal protrusion points, D_sl and D_sr) to the total area of the fruit, multiplied by 10. T.A. version 3.0 .
database_cross_reference: SGN:EVDK

proximal fruit end blockiness
type: Class
subclass of: Restriction
  on property: part of
  some values from: proximal fruit end shape
definition: The ratio of the fruit width at the proximal end to the width mid-height.
database_cross_reference: PATO:0001195
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008002
has_obo_namespace: solanaceae_phenotype
has_related_synonym: pblk
id: SP:0000078

Axiom
annotated source: proximal fruit end blockiness
annotated property: definition
annotated target: The ratio of the fruit width at the proximal end to the width mid-height.
database_cross_reference: SGN:EVDK

proximal fruit end indentation
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end shape
definition: Proximal fruit end indented area/total fruit area. The ratio of the area of the proximal indentation (bounded by the proximal shoulder points, P_sl and P_sr) to the total area of the fruit, multiplied by 10. T.A. version 3.0 .
database_cross_reference: PATO:0001195
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008002
has_obo_namespace: solanaceae_phenotype
id: SP:0000079

Axiom
annotated source: proximal fruit end indentation
annotated property: definition
annotated target: Proximal fruit end indented area/total fruit area. The ratio of the area of the proximal indentation (bounded by the proximal shoulder points, P_sl and P_sr) to the total area of the fruit, multiplied by 10. T.A. version 3.0 .
database_cross_reference: SGN:EVDK

fruit mass, weight in grams
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit
definition: The mass of the fruit measured in grams.
created by: naama
creation date: 2008-02-12T03:11:00Z
database_cross_reference: PATO:0000125
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: fruit weight
has_related_synonym: fw
id: SP:0000080

Axiom
annotated source: fruit mass, weight in grams
annotated property: definition
annotated target: The mass of the fruit measured in grams.
database_cross_reference: SGN:EVDK

homeotic mutation
type: Class
subclass of: flower morphology
database_cross_reference: PO:0007600
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000081

flower organ size
type: Class
subclass of: flower morphology
database_cross_reference: PATO:0000117
database_cross_reference: PO:0007600
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000082

flower organ width
type: Class
subclass of: flower organ size
database_cross_reference: PATO:0000921
database_cross_reference: PO:0007600
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000083

other flower morphology
type: Class
definition: OBSOLETE. Replaced by parent term SP:0000008 flower morphology.
database_cross_reference: PO:0007600
has_obo_namespace: solanaceae_phenotype
id: SP:0000084
deprecated: true

Axiom
annotated source: other flower morphology
annotated property: definition
annotated target: OBSOLETE. Replaced by parent term SP:0000008 flower morphology.
database_cross_reference: SGN:nm

fruit area, measurement in square centimeters, cm^2
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit size
definition: The area of the fruit in cm^2.
created by: naama
creation date: 2008-02-12T03:11:00Z
database_cross_reference: PATO:0001323
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000085

Axiom
annotated source: fruit area, measurement in square centimeters, cm^2
annotated property: definition
annotated target: The area of the fruit in cm^2.
database_cross_reference: SGN:EVDK

fruit length
type: Class
subclass of: fruit size
definition: The length of the fruit.
created by: naama
creation date: 2008-02-12T03:11:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_exact_synonym: fruit height
has_obo_namespace: solanaceae_phenotype
id: SP:0000086

Axiom
annotated source: fruit length
annotated property: definition
annotated target: The length of the fruit.
database_cross_reference: SGN:EVDK

fruit perimeter, measurement in centimeters
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit size
definition: The maximum perimeter of the fruit in cm.
created by: naama
creation date: 2008-02-12T03:11:00Z
database_cross_reference: PATO:0001711
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: fruit circumference
has_related_synonym: per
id: SP:0000087

Axiom
annotated source: fruit perimeter, measurement in centimeters
annotated property: definition
annotated target: The maximum perimeter of the fruit in cm.
database_cross_reference: SGN:EVDK

fruit width
type: Class
subclass of: fruit size
definition: The width of the fruit.
created by: naama
creation date: 2008-02-12T03:11:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: fd1
has_related_synonym: fruit diameter
id: SP:0000088

Axiom
annotated source: fruit width
annotated property: definition
annotated target: The width of the fruit.
database_cross_reference: SGN:EVDK

fruit locule number, counting
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit morphology
definition: The number of locules in the fruit. This data is taken in the transversal section.
created by: naama
creation date: 2008-02-12T03:30:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: lcn
id: SP:0000089

Axiom
annotated source: fruit locule number, counting
annotated property: definition
annotated target: The number of locules in the fruit. This data is taken in the transversal section.
database_cross_reference: SGN:EVDK

placenta area
type: Class
subclass of: fruit size
definition: The area of the placenta.
created by: naama
creation date: 2008-02-13T09:41:00Z
database_cross_reference: PO:0004535
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
has_obo_namespace: solanaceae_phenotype
id: SP:0000090

Axiom
annotated source: placenta area
annotated property: definition
annotated target: The area of the placenta.
database_cross_reference: SGN:EVDK

white flower
type: Class
subclass of: flower color phenotypic values
database_cross_reference: PATO:0000323
database_cross_reference: PO:0007600
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000091

pale yellow flower
type: Class
subclass of: yellow flower color
database_cross_reference: PATO:0001264
database_cross_reference: PO:0007600
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000092

strong yellow flower
type: Class
subclass of: yellow flower color
database_cross_reference: PATO:0001263
database_cross_reference: PO:0007600
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000093

fruit color uniformity
type: Class
subclass of: fruit color
definition: The proportion of the 2D area of the red color epicarp out of the total epicarp area visible from a top view of the proximal fruit end.
created by: naama
creation date: 2008-02-13T10:05:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000094

Axiom
annotated source: fruit color uniformity
annotated property: definition
annotated target: The proportion of the 2D area of the red color epicarp out of the total epicarp area visible from a top view of the proximal fruit end.
database_cross_reference: SGN:EVDK

pericarp area in square centimeter, cm^2
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: pericarp
definition: The area of the pericarp (cm^2).
created by: naama
creation date: 2008-02-12T03:36:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009084
has_obo_namespace: solanaceae_phenotype
id: SP:0000095

Axiom
annotated source: pericarp area in square centimeter, cm^2
annotated property: definition
annotated target: The area of the pericarp (cm^2).
database_cross_reference: SGN:EVDK

septum and pericarp area, calculation in square centimeters, cm^2
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit size
definition: The sum of the areas of the septum and the pericarp in cm^2.
created by: naama
creation date: 2008-02-12T03:36:00Z
database_cross_reference: PO:0005008
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
has_obo_namespace: solanaceae_phenotype
id: SP:0000096

Axiom
annotated source: septum and pericarp area, calculation in square centimeters, cm^2
annotated property: definition
annotated target: The sum of the areas of the septum and the pericarp in cm^2.
database_cross_reference: SGN:EVDK

epicarp color
type: Class
subclass of: fruit color
created by: naama
creation date: 2008-02-12T03:40:00Z
database_cross_reference: PATO:0000014
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009085
has_obo_namespace: solanaceae_phenotype
id: SP:0000097

mesocarp color
type: Class
subclass of: fruit color
created by: naama
creation date: 2008-02-12T03:40:00Z
database_cross_reference: PATO:0000014
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009087
has_obo_namespace: solanaceae_phenotype
id: SP:0000098

endocarp color
type: Class
subclass of: fruit color
created by: naama
creation date: 2008-02-12T03:40:00Z
database_cross_reference: PATO:0000014
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009086
has_obo_namespace: solanaceae_phenotype
id: SP:0000099

seed
type: Class
subclass of: Solanaceae phenotype ontology
created by: naama
creation date: 2008-02-22T10:02:00Z
database_cross_reference: PO:0001170
database_cross_reference: PO:0009010
has_obo_namespace: solanaceae_phenotype
id: SP:0000100

small fruit
type: Class
subclass of: fruit size value
database_cross_reference: PATO:0000587
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000101

large fruit
type: Class
subclass of: fruit size value
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000102

fruit lobedness degree
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape
definition: Fruit bumpiness index. The standard deviation of distances (d) from the center of the fruit (assuming all pixels have equal mass) to the perimeter, multiplied by 100.
created by: naama
creation date: 2008-02-22T10:26:00Z
database_cross_reference: PATO:0000052
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: fruit bumpiness
id: SP:0000103

Axiom
annotated source: fruit lobedness degree
annotated property: definition
annotated target: Fruit bumpiness index. The standard deviation of distances (d) from the center of the fruit (assuming all pixels have equal mass) to the perimeter, multiplied by 100.
database_cross_reference: SGN:EVDK

seed weight
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: seed
definition: Average seed weight in grams
created by: naama
creation date: 2008-02-22T10:27:00Z
database_cross_reference: PATO:0000125
database_cross_reference: PO:0001170
database_cross_reference: PO:0009010
has_obo_namespace: solanaceae_phenotype
id: SP:0000104

Axiom
annotated source: seed weight
annotated property: definition
annotated target: Average seed weight in grams
database_cross_reference: SGN:EVDK

seed number per fruit
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: seed
definition: Average number of seeds per fruit.
created by: naama
creation date: 2008-02-22T10:27:00Z
database_cross_reference: PATO:0000053
database_cross_reference: PO:0001170
database_cross_reference: PO:0009010
has_obo_namespace: solanaceae_phenotype
id: SP:0000105

Axiom
annotated source: seed number per fruit
annotated property: definition
annotated target: Average number of seeds per fruit.
database_cross_reference: SGN:EVDK

fruit number
type: Class
subclass of: fruit
subclass of: yield
definition: Number of fruits per plant.
created by: naama
creation date: 2008-02-22T10:28:00Z
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000106

Axiom
annotated source: fruit number
annotated property: definition
annotated target: Number of fruits per plant.
database_cross_reference: SGM:NM

Percent of fruits with less than 10 seeds
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit number
created by: naama
creation date: 2008-02-22T10:29:00Z
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000107

leaf
type: Class
subclass of: Solanaceae phenotype ontology
created by: naama
creation date: 2008-02-22T10:30:00Z
database_cross_reference: PO:0001050
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
id: SP:0000108

leaf number
type: Class
subclass of: leaf
created by: naama
creation date: 2008-02-22T10:30:00Z
database_cross_reference: PATO:0000053
database_cross_reference: PO:0001050
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
id: SP:0000109

germination
type: Class
subclass of: seedling
database_cross_reference: PO:0007057
database_cross_reference: PO:0009010
has_obo_namespace: solanaceae_phenotype
id: SP:0000110

long fruit
type: Class
subclass of: fruit shape phenotypic values
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000111

rounded fruit
type: Class
subclass of: fruit shape phenotypic values
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000112

other fruit morphology
type: Class
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000113
deprecated: true

number of leaves to 1st inflorescence
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf number
created by: naama
creation date: 2008-02-22T10:30:00Z
database_cross_reference: PATO:0000053
database_cross_reference: PO:0007047
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
id: SP:0000114

flower
type: Class
subclass of: Solanaceae phenotype ontology
definition: Flower related traits and phenotypes.
created by: naama
creation date: 2008-02-22T10:47:00Z
database_cross_reference: PO:0007615
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000115

number of flowers per inflorescence
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: inflorescence
subclass of: Restriction
  on property: variable_of
  some values from: flower number
definition: Count of the number of flowers per one inflorescence.
created by: naama
creation date: 2008-02-22T10:47:00Z
database_cross_reference: PATO:0000053
database_cross_reference: PO:0007615
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000116

flower number
type: Class
subclass of: flower
created by: naama
creation date: 2008-02-22T10:47:00Z
database_cross_reference: PATO:0000053
database_cross_reference: PO:0007615
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
has_related_synonym: count
id: SP:0000117

fruit glossiness estimation
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: epicarp color
definition: Visual estimation of fruit glossiness 0-3 scale.
created by: naama
creation date: 2008-02-22T10:47:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009085
has_obo_namespace: solanaceae_phenotype
id: SP:0000118

Axiom
annotated source: fruit glossiness estimation
annotated property: definition
annotated target: Visual estimation of fruit glossiness 0-3 scale.
database_cross_reference: SGN:EVDK

fruit firmness estimation
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit ripening
definition: Visual estimation of fruit firmness 0-4 scale.
created by: naama
creation date: 2008-02-22T10:47:00Z
database_cross_reference: PATO:0000037
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000119

Axiom
annotated source: fruit firmness estimation
annotated property: definition
annotated target: Visual estimation of fruit firmness 0-4 scale.
database_cross_reference: SGN:EVDK

seedling lethal
type: Class
subclass of: seedling
database_cross_reference: PATO:0000718
database_cross_reference: PO:0000003
database_cross_reference: PO:0007030
database_cross_reference: PO:0007131
has_obo_namespace: solanaceae_phenotype
id: SP:0000120

yellow fruit
type: Class
subclass of: fruit color phenotypic values
database_cross_reference: PATO:0000324
database_cross_reference: PO:0007038
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000121

orange fruit
type: Class
subclass of: fruit color phenotypic values
database_cross_reference: PATO:0000953
database_cross_reference: PO:0007038
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000122

dark red fruit
type: Class
subclass of: fruit color phenotypic values
database_cross_reference: PATO:0001261
database_cross_reference: PO:0007038
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000123

epicarp texture
type: Class
subclass of: fruit morphology
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009085
has_obo_namespace: solanaceae_phenotype
id: SP:0000124

green fruit
type: Class
subclass of: fruit color phenotypic values
database_cross_reference: PATO:0000320
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000125

days to first flowering
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: flowering timing
definition: Number of days to opening of third inflorescence after transplanting.
created by: naama
creation date: 2008-02-22T03:31:00Z
database_cross_reference: PATO:0000081
database_cross_reference: PO:0007016
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000126

Axiom
annotated source: days to first flowering
annotated property: definition
annotated target: Number of days to opening of third inflorescence after transplanting.
database_cross_reference: SGN:EVDK

radial fruit cracking
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: epicarp texture
definition: Estimation of radial fruit cracking 0-5 scale
created by: naama
creation date: 2008-02-22T10:47:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009085
has_obo_namespace: solanaceae_phenotype
id: SP:0000127

Axiom
annotated source: radial fruit cracking
annotated property: definition
annotated target: Estimation of radial fruit cracking 0-5 scale
database_cross_reference: SGN:EVDK

plant habit index
type: Class
subclass of: plant habit
created by: naama
creation date: 2008-02-22T10:47:00Z
has_obo_namespace: solanaceae_phenotype
has_related_synonym: growth habit
has_related_synonym: plant habit
id: SP:0000128

fruits per flowers
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit number
definition: A measure of how many flowers develop into fruit. Counting.
created by: naama
creation date: 2008-02-22T03:36:00Z
database_cross_reference: PATO:0000053
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000129

Axiom
annotated source: fruits per flowers
annotated property: definition
annotated target: A measure of how many flowers develop into fruit. Counting.
database_cross_reference: SGN:EVDK

slow germination
type: Class
subclass of: germination
database_cross_reference: PATO:0001494
database_cross_reference: PO:0007030
database_cross_reference: PO:0007057
database_cross_reference: PO:0009010
has_obo_namespace: solanaceae_phenotype
id: SP:0000130

early ripe
type: Class
subclass of: fruit ripening timing
database_cross_reference: PATO:0000694
database_cross_reference: PO:0007010
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000131

late ripe
type: Class
subclass of: fruit ripening timing
database_cross_reference: PATO:0000502
database_cross_reference: PO:0007010
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000132

fruit mid-height width
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit width
definition: The width measured at half of the fruits height in cm.
created by: naama
creation date: 2008-03-12T01:08:00Z
database_cross_reference: PATO:0000921
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000133

Axiom
annotated source: fruit mid-height width
annotated property: definition
annotated target: The width measured at half of the fruits height in cm.
database_cross_reference: SGN:EVDK

fruit widest width
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit width
definition: The maximum width of the fruit in cm.
created by: naama
creation date: 2008-03-12T01:08:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:9001
has_obo_namespace: solanaceae_phenotype
has_related_synonym: fruit maximum width
id: SP:0000134

Axiom
annotated source: fruit widest width
annotated property: definition
annotated target: The maximum width of the fruit in cm.
database_cross_reference: SGN:EVDK

fruit length mid-width
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit length
definition: The height measured at half of the fruit width in cm.
created by: naama
creation date: 2008-03-12T01:11:00Z
database_cross_reference: PATO:0000122
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_exact_synonym: height mid-width
has_obo_namespace: solanaceae_phenotype
id: SP:0000135

Axiom
annotated source: fruit length mid-width
annotated property: definition
annotated target: The height measured at half of the fruit width in cm.
database_cross_reference: SGN:EVDK

fruit longest length
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit length
definition: The maximum length of the fruit in cm.
created by: naama
creation date: 2008-03-12T01:11:00Z
database_cross_reference: PATO:0000122
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_exact_synonym: fruit highest height
has_exact_synonym: fruit maximum height
has_obo_namespace: solanaceae_phenotype
id: SP:0000136

Axiom
annotated source: fruit longest length
annotated property: definition
annotated target: The maximum length of the fruit in cm.
database_cross_reference: SGN:EVDK

proximal fruit end blockiness 5%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end blockiness
created by: naama
creation date: 2008-03-12T01:26:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008002
has_obo_namespace: solanaceae_phenotype
id: SP:0000137

proximal fruit end blockiness 10%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end blockiness
created by: naama
creation date: 2008-03-12T01:26:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008002
has_obo_namespace: solanaceae_phenotype
id: SP:0000138

proximal fruit end blockiness 20%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end blockiness
created by: naama
creation date: 2008-03-12T01:26:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008002
has_obo_namespace: solanaceae_phenotype
id: SP:0000139

proximal fruit end blockiness 30%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end blockiness
created by: naama
creation date: 2008-03-12T01:26:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008002
has_obo_namespace: solanaceae_phenotype
id: SP:0000140

partial sterility
type: Class
subclass of: sterility
database_cross_reference: PO:0007042
database_cross_reference: PO:0007616
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000141

full sterility
type: Class
subclass of: sterility
database_cross_reference: PO:0007042
database_cross_reference: PO:0007616
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000142

distal fruit end blockiness 5%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end blockiness
created by: naama
creation date: 2008-03-12T01:26:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008001
has_obo_namespace: solanaceae_phenotype
id: SP:0000143

distal fruit end blockiness 10%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end blockiness
created by: naama
creation date: 2008-03-12T01:26:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008001
has_obo_namespace: solanaceae_phenotype
id: SP:0000144

distal fruit end blockiness 20%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end blockiness
created by: naama
creation date: 2008-03-12T01:26:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008001
has_obo_namespace: solanaceae_phenotype
id: SP:0000145

distal fruit end blockiness 30%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end blockiness
created by: naama
creation date: 2008-03-12T01:26:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008001
has_obo_namespace: solanaceae_phenotype
id: SP:0000146

fruit shape triangle 5%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape triangle
created by: naama
creation date: 2008-03-12T01:27:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000147

fruit shape triangle 10%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape triangle
created by: naama
creation date: 2008-03-12T01:27:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000148

fruit shape triangle 20%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape triangle
created by: naama
creation date: 2008-03-12T01:27:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000149

fruit shape triangle 30%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape triangle
created by: naama
creation date: 2008-03-12T01:27:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000150

necrosis
type: Class
subclass of: disease and stress response
database_cross_reference: PO:0007130
database_cross_reference: PO:0007134
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
id: SP:0000151

wilting
type: Class
subclass of: disease and stress response
database_cross_reference: PO:0000003
database_cross_reference: PO:0007130
database_cross_reference: PO:0007134
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
id: SP:0000152

other disease response
type: Class
definition: OBSOLETE. Replaced by parent term SP:0000015 (disease and stress response).
database_cross_reference: PO:0000003
database_cross_reference: PO:0007130
database_cross_reference: PO:0007134
has_obo_namespace: solanaceae_phenotype
id: SP:0000153
deprecated: true

Axiom
annotated source: other disease response
annotated property: definition
annotated target: OBSOLETE. Replaced by parent term SP:0000015 (disease and stress response).
database_cross_reference: SGN:nm

proximal fruit end height
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end shape
definition: The ratio of the average height of the shoulder points above the proximal end point to maximum height. The height of the shoulder points (H_sl and H_sr) is measured against a line through the proximal point that is perpendicular to the line between the proximal point and the fruit center of weight (assuming all pixels have equal mass).
created by: naama
creation date: 2008-03-17T01:50:00Z
database_cross_reference: PATO:0001195
database_cross_reference: PATO:f0000119
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0008002
has_obo_namespace: solanaceae_phenotype
has_related_synonym: shoulder height
id: SP:0000154

Axiom
annotated source: proximal fruit end height
annotated property: definition
annotated target: The ratio of the average height of the shoulder points above the proximal end point to maximum height. The height of the shoulder points (H_sl and H_sr) is measured against a line through the proximal point that is perpendicular to the line between the proximal point and the fruit center of weight (assuming all pixels have equal mass).
database_cross_reference: SGN:EVDK

distal angle micro 2%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end angle
created by: naama
creation date: 2008-03-25T11:13:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000155

distal angle micro 3%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end angle
created by: naama
creation date: 2008-03-25T11:13:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000156

distal angle micro 5%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end angle
created by: naama
creation date: 2008-03-25T11:13:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000157

distal angle macro 10%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end angle
created by: naama
creation date: 2008-03-25T11:13:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000158

distal angle macro 15%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end angle
created by: naama
creation date: 2008-03-25T11:13:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000159

distal angle macro 20%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end angle
created by: naama
creation date: 2008-03-25T11:13:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000160

horizontal asymmetry obovoid
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: horizontal asymmetry
definition: If the area of the fruit is greater below mid-height than above it, horizontal asymmetry obovoid is the average distance (Res_h) between a horizontal line through the fruit at mid-height and the midpoint of the fruit height at each width. Otherwise, it is 0.
created by: naama
creation date: 2008-03-25T11:17:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000161

Axiom
annotated source: horizontal asymmetry obovoid
annotated property: definition
annotated target: If the area of the fruit is greater below mid-height than above it, horizontal asymmetry obovoid is the average distance (Res_h) between a horizontal line through the fruit at mid-height and the midpoint of the fruit height at each width. Otherwise, it is 0.
database_cross_reference: SGN:EVDK

horizontal asymmetry ovoid
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: horizontal asymmetry
definition: If the area of the fruit is greater above mid-height than below it, horizontal asymmetry ovoid is the average distance (Res_h) between a horizontal line through the fruit at mid-height and the midpoint of the fruit height at each width. Otherwise, it is 0.
created by: naama
creation date: 2008-03-25T11:17:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000162

Axiom
annotated source: horizontal asymmetry ovoid
annotated property: definition
annotated target: If the area of the fruit is greater above mid-height than below it, horizontal asymmetry ovoid is the average distance (Res_h) between a horizontal line through the fruit at mid-height and the midpoint of the fruit height at each width. Otherwise, it is 0.
database_cross_reference: SGN:EVDK

distal angle macro 25%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end angle
created by: naama
creation date: 2008-03-25T11:19:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000163

eccentricity area index
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape eccentric
definition: Area ellipse / total fruit area.
created by: naama
creation date: 2008-03-31T10:09:00Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_exact_synonym: oel
has_obo_namespace: solanaceae_phenotype
has_related_synonym: obovate (ellipse)
id: SP:0000164

Axiom
annotated source: eccentricity area index
annotated property: definition
annotated target: Area ellipse / total fruit area.
database_cross_reference: SGN:EVDK

total soluble solids
type: Class
subclass of: Variables
subclass of: Restriction
  on property: attribute_of
  some values from: fruit metabolites
subclass of: Restriction
  on property: variable_of
  some values from: sugars
definition: The total soluble solids in the fruit (usually sugars and acids).
has_exact_synonym: Brix
has_obo_namespace: solanaceae_phenotype
id: SP:0000165

Axiom
annotated source: total soluble solids
annotated property: definition
annotated target: The total soluble solids in the fruit (usually sugars and acids).
database_cross_reference: SGN:NM

citric acid
type: Class
subclass of: biochemical metabolites
subclass of: fruit metabolites
definition: Citric acid content in the fruit.
has_obo_namespace: solanaceae_phenotype
id: SP:0000166

Axiom
annotated source: citric acid
annotated property: definition
annotated target: Citric acid content in the fruit.
database_cross_reference: SGN:NM

fruit metabolites
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit
definition: The metabolites present in the fruit.
has_obo_namespace: solanaceae_phenotype
id: SP:0000167

Axiom
annotated source: fruit metabolites
annotated property: definition
annotated target: The metabolites present in the fruit.
database_cross_reference: SGN:NM

malic acid
type: Class
subclass of: biochemical metabolites
subclass of: fruit metabolites
definition: Malic acid content in the fruit.
has_obo_namespace: solanaceae_phenotype
id: SP:0000168

Axiom
annotated source: malic acid
annotated property: definition
annotated target: Malic acid content in the fruit.
database_cross_reference: SGN:NM

glutamic acid
type: Class
subclass of: biochemical metabolites
subclass of: fruit metabolites
definition: Glutamic acid content.
has_obo_namespace: solanaceae_phenotype
id: SP:0000169

Axiom
annotated source: glutamic acid
annotated property: definition
annotated target: Glutamic acid content.
database_cross_reference: SGN:NM

pH
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit metabolites
definition: The pH of the fruit.
has_obo_namespace: solanaceae_phenotype
id: SP:0000170

Axiom
annotated source: pH
annotated property: definition
annotated target: The pH of the fruit.
database_cross_reference: SGN:NM

Total organic acids
type: Class
subclass of: biochemical metabolites
subclass of: fruit metabolites
definition: The total content of organic acids.
has_obo_namespace: solanaceae_phenotype
id: SP:0000171

Axiom
annotated source: Total organic acids
annotated property: definition
annotated target: The total content of organic acids.
database_cross_reference: SGN:NM

total acids
type: Class
subclass of: biochemical metabolites
subclass of: fruit metabolites
definition: The total acid content.
has_obo_namespace: solanaceae_phenotype
id: SP:0000172

Axiom
annotated source: total acids
annotated property: definition
annotated target: The total acid content.
database_cross_reference: SGN:NM

fasciated
type: Class
subclass of: fruit shape phenotypic values
definition: Fasciated fruit shape. Multipe locules.
database_cross_reference: PATO:0000949
has_obo_namespace: solanaceae_phenotype
id: SP:0000173

Axiom
annotated source: fasciated
annotated property: definition
annotated target: Fasciated fruit shape. Multipe locules.
database_cross_reference: SGN:NM

determinate
type: Class
subclass of: plant habit phenotypic values
definition: Determinate growth of plant branches terminating with an inflorescence.
has_obo_namespace: solanaceae_phenotype
id: SP:0000174

Axiom
annotated source: determinate
annotated property: definition
annotated target: Determinate growth of plant branches terminating with an inflorescence.
database_cross_reference: SGN:NM

semi determinate
type: Class
subclass of: plant habit phenotypic values
definition: Semi-determinate growth of plant branches producing more inflorescences than determinate plants, but eventually terminating.
has_obo_namespace: solanaceae_phenotype
id: SP:0000175

Axiom
annotated source: semi determinate
annotated property: definition
annotated target: Semi-determinate growth of plant branches producing more inflorescences than determinate plants, but eventually terminating.
database_cross_reference: SGN:NM

indeterminate
type: Class
subclass of: plant habit phenotypic values
definition: Ineterminate growth of plant branches. Continual twig elongation and bud formation.
has_obo_namespace: solanaceae_phenotype
id: SP:0000176

Axiom
annotated source: indeterminate
annotated property: definition
annotated target: Ineterminate growth of plant branches. Continual twig elongation and bud formation.
database_cross_reference: SGN:NM

compound leaf
type: Class
subclass of: leaf complexity phenotpic values
database_cross_reference: PATO:0001504
database_cross_reference: PO:0001050
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
id: SP:0000177

simple leaf
type: Class
subclass of: leaf complexity phenotpic values
database_cross_reference: PATO:0001503
database_cross_reference: PO:0001050
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
id: SP:0000178

distal fruit end
type: Class
subclass of: fruit end
definition: The distal end of the fruit (tip).
database_cross_reference: PATO:0001234
has_obo_namespace: solanaceae_phenotype
id: SP:0000179

Axiom
annotated source: distal fruit end
annotated property: definition
annotated target: The distal end of the fruit (tip).
database_cross_reference: SGN:NM

proximal fruit end
type: Class
subclass of: fruit end
definition: The proximal end of the fruit (shoulders).
database_cross_reference: PATO:0001195
has_exact_synonym: shoulders
has_obo_namespace: solanaceae_phenotype
id: SP:0000180

Axiom
annotated source: proximal fruit end
annotated property: definition
annotated target: The proximal end of the fruit (shoulders).
database_cross_reference: SGN:NM

distal fruit end color
type: Class
subclass of: fruit color
subclass of: distal fruit end
definition: The color of the distal fruit end.
database_cross_reference: PATO:0000014
database_cross_reference: PATO:0001234
has_obo_namespace: solanaceae_phenotype
id: SP:0000181

Axiom
annotated source: distal fruit end color
annotated property: definition
annotated target: The color of the distal fruit end.
database_cross_reference: SGN:NM

proximal fruit end color
type: Class
subclass of: fruit color
subclass of: proximal fruit end
definition: The color of the proximal fruit end (shoulders).
database_cross_reference: PATO:0000014
database_cross_reference: PATO:0001195
has_obo_namespace: solanaceae_phenotype
id: SP:0000182

Axiom
annotated source: proximal fruit end color
annotated property: definition
annotated target: The color of the proximal fruit end (shoulders).
database_cross_reference: SGN:NM

leaf veins
type: Class
subclass of: leaf morphology
definition: The leaf vascular tissue.
database_cross_reference: PO:0020139
has_obo_namespace: solanaceae_phenotype
id: SP:0000183

Axiom
annotated source: leaf veins
annotated property: definition
annotated target: The leaf vascular tissue.
database_cross_reference: SGN:NM

tuber epidermis
type: Class
subclass of: Restriction
  on property: part of
  some values from: tuber
definition: Epidermal layer of a tuber.
database_cross_reference: PO:0025048
has_exact_synonym: tuber skin
has_obo_namespace: solanaceae_phenotype
id: SP:0000184

Axiom
annotated source: tuber epidermis
annotated property: definition
annotated target: Epidermal layer of a tuber.
database_cross_reference: SGN:NM

subterranean tuber epidermis
type: Axiom
annotated source: tuber epidermis
annotated property: database_cross_reference
annotated target: PO:0025048

tuber epidermis color
type: Class
subclass of: tuber epidermis
definition: The color of the tuber epidermal layer.
database_cross_reference: PATO:0000014
database_cross_reference: PO:0025048
has_exact_synonym: skin color
has_obo_namespace: solanaceae_phenotype
id: SP:0000185

Axiom
annotated source: tuber epidermis color
annotated property: definition
annotated target: The color of the tuber epidermal layer.
database_cross_reference: SGN:NM

tuber epidermis texture
type: Class
subclass of: tuber epidermis
definition: The texture of the tuber epidermal layer.
database_cross_reference: PATO:0000150
database_cross_reference: PO:0025048
has_exact_synonym: skin texture
has_obo_namespace: solanaceae_phenotype
id: SP:0000186

Axiom
annotated source: tuber epidermis texture
annotated property: definition
annotated target: The texture of the tuber epidermal layer.
database_cross_reference: SGN:NM

tuber flesh
type: Class
subclass of: Restriction
  on property: part of
  some values from: tuber
definition: The flesh layer of the tuber.
database_cross_reference: PO:0025038
has_obo_namespace: solanaceae_phenotype
id: SP:0000187

Axiom
annotated source: tuber flesh
annotated property: definition
annotated target: The flesh layer of the tuber.
database_cross_reference: SGN:NM

subterranean tuber storage parenchyma
type: Axiom
annotated source: tuber flesh
annotated property: database_cross_reference
annotated target: PO:0025038

tuber flesh color
type: Class
subclass of: Restriction
  on property: part of
  some values from: tuber flesh
definition: The color of the tuber flesh layer.
database_cross_reference: PATO:0000014
database_cross_reference: PO:0025038
has_obo_namespace: solanaceae_phenotype
id: SP:0000188

Axiom
annotated source: tuber flesh color
annotated property: definition
annotated target: The color of the tuber flesh layer.
database_cross_reference: SGN:NM

tuber flesh pigment pattern
type: Class
subclass of: tuber flesh
definition: The pattern of pigmentation of the tuber flesh.
database_cross_reference: PATO:0000060
database_cross_reference: PO:0025038
has_obo_namespace: solanaceae_phenotype
id: SP:0000189

Axiom
annotated source: tuber flesh pigment pattern
annotated property: definition
annotated target: The pattern of pigmentation of the tuber flesh.
database_cross_reference: SGN:NM

tuber eye
type: Class
subclass of: Restriction
  on property: part of
  some values from: tuber
definition: A structure on the tuber surface that can sprout. It also has a significance in determining the processing quality.
database_cross_reference: PO:0025042
has_obo_namespace: solanaceae_phenotype
id: SP:0000190

Axiom
annotated source: tuber eye
annotated property: definition
annotated target: A structure on the tuber surface that can sprout. It also has a significance in determining the processing quality.
database_cross_reference: SGN:curators

A tuber axillary vegetative bud that is part of a subterranean tuber
type: Axiom
annotated source: tuber eye
annotated property: database_cross_reference
annotated target: PO:0025042

tuber eye depth
type: Class
subclass of: Restriction
  on property: part of
  some values from: tuber eye
definition: The depth of the tuber eye.
database_cross_reference: PATO:0001595
database_cross_reference: PO:0025042
has_obo_namespace: solanaceae_phenotype
id: SP:0000191

Axiom
annotated source: tuber eye depth
annotated property: definition
annotated target: The depth of the tuber eye.
database_cross_reference: SGN:curators

shoot phenotype
type: Class
subclass of: Solanaceae phenotype ontology
definition: Phenotype measured using part of the sporophyte, which is composed of the stems and leaves, and includes shoot apical meristems.
database_cross_reference: PO:0009006
has_exact_synonym: vine phenotype
has_obo_namespace: solanaceae_phenotype
id: SP:0000192

Axiom
annotated source: shoot phenotype
annotated property: definition
annotated target: Phenotype measured using part of the sporophyte, which is composed of the stems and leaves, and includes shoot apical meristems.
database_cross_reference: SGN:curators

stem
type: Class
subclass of: Restriction
  on property: part of
  some values from: shoot phenotype
definition: The axial system of plants that bears leaves and buds.
database_cross_reference: PO:0007089
database_cross_reference: PO:0009047
has_obo_namespace: solanaceae_phenotype
id: SP:0000193

Axiom
annotated source: stem
annotated property: definition
annotated target: The axial system of plants that bears leaves and buds.
database_cross_reference: APWeb:Glossary

erect
type: Class
subclass of: plant habit phenotypic values
definition: Erect plant growth habit.
database_cross_reference: PATO:0000622
has_exact_synonym: upright
has_obo_namespace: solanaceae_phenotype
id: SP:0000194

Axiom
annotated source: erect
annotated property: definition
annotated target: Erect plant growth habit.
database_cross_reference: PVP:3

semi erect
type: Class
subclass of: plant habit phenotypic values
definition: Semi erect plant growth habit.
has_obo_namespace: solanaceae_phenotype
id: SP:0000195

Axiom
annotated source: semi erect
annotated property: definition
annotated target: Semi erect plant growth habit.
database_cross_reference: PVP:5

spreading
type: Class
subclass of: plant habit phenotypic values
definition: Spreading plant growth habit.
database_cross_reference: PATO:0001855
has_obo_namespace: solanaceae_phenotype
has_related_synonym: horizontal
id: SP:0000196

Axiom
annotated source: spreading
annotated property: definition
annotated target: Spreading plant growth habit.
database_cross_reference: PVP:7

post harvest quality
type: Class
subclass of: Solanaceae phenotype ontology
definition: After-harvest quality.
has_obo_namespace: solanaceae_phenotype
id: SP:0000197

Axiom
annotated source: post harvest quality
annotated property: definition
annotated target: After-harvest quality.
database_cross_reference: SGN:NM

yield
type: Class
subclass of: post harvest quality
definition: The total yield of the harvest.
has_obo_namespace: solanaceae_phenotype
id: SP:0000198

Axiom
annotated source: yield
annotated property: definition
annotated target: The total yield of the harvest.
database_cross_reference: SGN:NM

tuber epidermis pigment pattern
type: Class
subclass of: tuber epidermis
definition: The pattern of the tuber pigmentation.
database_cross_reference: PATO:0000060
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000199

Axiom
annotated source: tuber epidermis pigment pattern
annotated property: definition
annotated target: The pattern of the tuber pigmentation.
database_cross_reference: SGN:NM

tuber morphology
type: Class
subclass of: Restriction
  on property: part of
  some values from: tuber
definition: The morphological characteristics of the tuber.
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000200

Axiom
annotated source: tuber morphology
annotated property: definition
annotated target: The morphological characteristics of the tuber.
database_cross_reference: SGN:NM

tuber shape
type: Class
subclass of: tuber morphology
definition: The shape of the tuber.
database_cross_reference: PATO:0000052
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000201

Axiom
annotated source: tuber shape
annotated property: definition
annotated target: The shape of the tuber.
database_cross_reference: SGN:NM

tuber size
type: Class
subclass of: tuber morphology
definition: The physical size of the tuber.
database_cross_reference: PATO:0000117
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000202

Axiom
annotated source: tuber size
annotated property: definition
annotated target: The physical size of the tuber.
database_cross_reference: SGN:NM

tuber length
type: Class
subclass of: tuber size
database_cross_reference: PATO:0000122
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000203

tuber width
type: Class
subclass of: tuber size
database_cross_reference: PATO:0000921
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000204

whole plant phenotype
type: Class
subclass of: Solanaceae phenotype ontology
definition: A phenotype of the entire plant, including roots, shoots and leaves, at any stage of its life cycle.
database_cross_reference: PO:0000003
has_obo_namespace: solanaceae_phenotype
id: SP:0000205

Axiom
annotated source: whole plant phenotype
annotated property: definition
annotated target: A phenotype of the entire plant, including roots, shoots and leaves, at any stage of its life cycle.
database_cross_reference: SGN:AP

shoot maturity
type: Class
subclass of: shoot phenotype
subclass of: whole plant phenotype
definition: An assessment of the maturity of the shoot (vine).
database_cross_reference: PATO:0000261
database_cross_reference: PO:0007112
database_cross_reference: PO:0009006
has_exact_synonym: vine maturity
has_obo_namespace: solanaceae_phenotype
has_related_synonym: potato vine maturity (Potato Cooperators: There is considerable diversity among varieties with respect to how long they grow until they naturally senesce. 95 and 120DAP were chosen so we could evaluate differences among early-maturing varieties (95DAP) and among later maturing varieties (120DAP) ).
id: SP:0000206

Axiom
annotated source: shoot maturity
annotated property: definition
annotated target: An assessment of the maturity of the shoot (vine).
database_cross_reference: SGN:curators

Axiom
annotated source: shoot maturity
annotated property: has_related_synonym
annotated target: potato vine maturity (Potato Cooperators: There is considerable diversity among varieties with respect to how long they grow until they naturally senesce. 95 and 120DAP were chosen so we could evaluate differences among early-maturing varieties (95DAP) and among later maturing varieties (120DAP) ).
database_cross_reference: Potato_Cooperators:WSD

early shoot maturity
type: Class
definition: An assesment of the shoot at an early stage of maturity.
has_obo_namespace: solanaceae_phenotype
has_related_synonym: Potato: 95 days after pollination (95DAP)
id: SP:0000207
deprecated: true

Axiom
annotated source: early shoot maturity
annotated property: definition
annotated target: An assesment of the shoot at an early stage of maturity.
database_cross_reference: SGN:curators

Axiom
annotated source: early shoot maturity
annotated property: has_related_synonym
annotated target: Potato: 95 days after pollination (95DAP)
database_cross_reference: POtato_Cooperators:WSD

mid shoot maturity
type: Class
definition: An assesment of the shoot at a mid stage of maturity.
has_obo_namespace: solanaceae_phenotype
id: SP:0000208
deprecated: true

Axiom
annotated source: mid shoot maturity
annotated property: definition
annotated target: An assesment of the shoot at a mid stage of maturity.
database_cross_reference: SGN:curators

late shoot maturity
type: Class
definition: An assesment of the shoot at a late stage of maturity.
has_obo_namespace: solanaceae_phenotype
has_related_synonym: Potato: 120 days after pollination (120DAP)
id: SP:0000209
deprecated: true

Axiom
annotated source: late shoot maturity
annotated property: definition
annotated target: An assesment of the shoot at a late stage of maturity.
database_cross_reference: SGN:curators

Axiom
annotated source: late shoot maturity
annotated property: has_related_synonym
annotated target: Potato: 120 days after pollination (120DAP)
database_cross_reference: Potato_Cooperators:WSD

shoot maturity 120 DAP
type: Class
subclass of: shoot maturity
definition: Assessment of the shoot maturity 120 days after pollination (DAP).
created by: naamamenda
creation date: 2010-05-14T03:02:56Z
database_cross_reference: PATO:0000261
database_cross_reference: PO:0007112
database_cross_reference: PO:0009006
has_obo_namespace: solanaceae_phenotype
has_related_synonym: potato vine maturity 120 DAP
id: SP:0000210

Axiom
annotated source: shoot maturity 120 DAP
annotated property: definition
annotated target: Assessment of the shoot maturity 120 days after pollination (DAP).
database_cross_reference: potato_cooperators:WDJ

shoot maturity 95DAP
type: Class
subclass of: shoot maturity
definition: Assessment of the shoot maturity 95 days after pollination (DAP).
created by: naamamenda
creation date: 2010-05-14T02:59:49Z
database_cross_reference: PATO:0000261
database_cross_reference: PO:0007112
database_cross_reference: PO:0009006
has_obo_namespace: solanaceae_phenotype
has_related_synonym: potato vine maturity 95 DAP
id: SP:0000211

Axiom
annotated source: shoot maturity 95DAP
annotated property: definition
annotated target: Assessment of the shoot maturity 95 days after pollination (DAP).
database_cross_reference: potato_cooperators:WDJ

tuber appearance
type: Class
subclass of: tuber morphology
definition: The overall appearance of the tuber. A 1-9 scale is used, with 1 the lowest score ("very poor") and 9 the highest (excellent).
created by: naamamenda
creation date: 2010-05-14T02:53:14Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000212

Axiom
annotated source: tuber appearance
annotated property: definition
annotated target: The overall appearance of the tuber. A 1-9 scale is used, with 1 the lowest score ("very poor") and 9 the highest (excellent).
database_cross_reference: NE:1014

tuber height
type: Class
subclass of: tuber size
created by: naamamenda
creation date: 2010-05-14T02:51:40Z
database_cross_reference: PATO:0000119
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000213

sucrose
type: Class
subclass of: sugars
definition: Sucrose content in mg/g fresh weight.
created by: Naama
creation date: 2010-05-14T03:59:01Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000214

Axiom
annotated source: sucrose
annotated property: definition
annotated target: Sucrose content in mg/g fresh weight.
database_cross_reference: SGN:NM

glucose
type: Class
subclass of: sugars
definition: Glucose content in mg/g fresh weight.
created by: Naama
creation date: 2010-05-14T04:02:11Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000215

Axiom
annotated source: glucose
annotated property: definition
annotated target: Glucose content in mg/g fresh weight.
database_cross_reference: SGN:NM

tuber mass
type: Class
subclass of: Restriction
  on property: part of
  some values from: tuber
definition: The mass of the tuber.
created by: Naama
creation date: 2010-05-18T11:03:02Z
database_cross_reference: PATO:0000125
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
has_related_synonym: tuber weight
id: SP:0000216

Axiom
annotated source: tuber mass
annotated property: definition
annotated target: The mass of the tuber.
database_cross_reference: SGN:NM

specific gravity
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit mass, weight in grams
subclass of: Restriction
  on property: part of
  some values from: tuber mass
definition: Weight in air / (weight in air -weight in water).
created by: Naama
creation date: 2010-05-18T11:49:44Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000217

Axiom
annotated source: specific gravity
annotated property: definition
annotated target: Weight in air / (weight in air -weight in water).
database_cross_reference: potato_cooperators:WDJ

specific gravity at harvest
type: Class
subclass of: specific gravity
definition: Weight in air / (weight in air -weight in water) measured at the time of harvest.
created by: Naama
creation date: 2010-05-18T11:54:44Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000218

Axiom
annotated source: specific gravity at harvest
annotated property: definition
annotated target: Weight in air / (weight in air -weight in water) measured at the time of harvest.
database_cross_reference: potato_cooperators:WDJ

specific gravity at storage
type: Class
subclass of: post harvest quality
subclass of: specific gravity
definition: Weight in air / (weight in air -weight in water) measured at storage.
created by: Naama
creation date: 2010-05-18T11:54:44Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000219

Axiom
annotated source: specific gravity at storage
annotated property: definition
annotated target: Weight in air / (weight in air -weight in water) measured at storage.
database_cross_reference: potato_cooperators:WDJ

heat sprout rating
type: Class
subclass of: post harvest quality
definition: A scale to measure the propensity of tubers to sprout in the soil under high temperatures.
created by: Naama
creation date: 2010-05-18T12:37:10Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000220

Axiom
annotated source: heat sprout rating
annotated property: definition
annotated target: A scale to measure the propensity of tubers to sprout in the soil under high temperatures.
database_cross_reference: potato_cooperators:DSD

processing quality
type: Class
subclass of: Solanaceae phenotype ontology
definition: Quality of processed plant product, typically used by the food industry.
created by: Naama
creation date: 2010-05-18T12:44:57Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000221

Axiom
annotated source: processing quality
annotated property: definition
annotated target: Quality of processed plant product, typically used by the food industry.
database_cross_reference: SGN:NM

chip color
type: Class
subclass of: processing quality
subclass of: Restriction
  on property: part of
  some values from: tuber flesh color
definition: The color of a fried chip.
created by: Naama
creation date: 2010-05-18T12:46:26Z
database_cross_reference: PATO:0000014
database_cross_reference: PO:0025038
has_obo_namespace: solanaceae_phenotype
id: SP:0000222

Axiom
annotated source: chip color
annotated property: definition
annotated target: The color of a fried chip.
database_cross_reference: SGN:NM

Qualitative color
type: Class
subclass of: chip color
definition: An estimate for the chip color. Scale is 1-5 with 1 being a light colored chip.
created by: Naama
creation date: 2010-05-18T12:47:53Z
database_cross_reference: PATO:0000014
database_cross_reference: PO:0025038
has_obo_namespace: solanaceae_phenotype
id: SP:0000223

Axiom
annotated source: Qualitative color
annotated property: definition
annotated target: An estimate for the chip color. Scale is 1-5 with 1 being a light colored chip.
database_cross_reference: potato_cooperators:DSD

Quantitative color
type: Class
subclass of: chip color
definition: A measurement of the chip color with a colorimeter at a specific wavelength.
created by: Naama
creation date: 2010-05-18T12:47:53Z
database_cross_reference: PATO:0000014
database_cross_reference: PO:0025038
has_obo_namespace: solanaceae_phenotype
id: SP:0000224

Axiom
annotated source: Quantitative color
annotated property: definition
annotated target: A measurement of the chip color with a colorimeter at a specific wavelength.
database_cross_reference: potato_cooperators:DSD

tuber cross section
type: Class
subclass of: tuber morphology
created by: Naama
creation date: 2010-05-19T11:59:39Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000225

tuber epidermis set depth
type: Class
subclass of: tuber epidermis
created by: Naama
creation date: 2010-05-19T12:04:16Z
database_cross_reference: PATO:0001595
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
has_related_synonym: tuber skin set depth
id: SP:0000226

tuber epidermis texture russet
type: Class
subclass of: tuber epidermis texture
created by: Naama
creation date: 2010-05-24T02:24:59Z
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000227

yellow flower color
type: Class
subclass of: flower color phenotypic values
created by: Naama
creation date: 2010-05-20T02:33:53Z
database_cross_reference: PATO:0000324
database_cross_reference: PO:0007600
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
id: SP:0000228

leaf length
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf size
definition: leaf length from the apex to the basal zone in cm.
created by: Naama
creation date: 2010-05-22T01:59:28Z
database_cross_reference: PATO:0000122
database_cross_reference: PO:0001052
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000370
id: SP:0000229

Axiom
annotated source: leaf length
annotated property: definition
annotated target: leaf length from the apex to the basal zone in cm.
database_cross_reference: SGN:EVDK

compound inflorescence
type: Class
subclass of: inflorescence structure - phenotypic values
created by: Naama
creation date: 2010-05-22T02:08:21Z
database_cross_reference: PATO:0001504
database_cross_reference: PO:0001083
database_cross_reference: PO:0009049
has_obo_namespace: solanaceae_phenotype
id: SP:0000230

shoot maturity very early
type: Class
subclass of: shoot maturity 120 DAP
subclass of: shoot maturity 95DAP
definition: Vine 100% dead
created by: Naama
creation date: 2010-05-25T01:30:26Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000231

Axiom
annotated source: shoot maturity very early
annotated property: definition
annotated target: Vine 100% dead
database_cross_reference: potato_cooperators:1

shoot maturity early
type: Class
subclass of: shoot maturity 120 DAP
subclass of: shoot maturity 95DAP
definition: Vine starting to senesce (yellowing evident).
created by: Naama
creation date: 2010-05-25T01:29:01Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000232

Axiom
annotated source: shoot maturity early
annotated property: definition
annotated target: Vine starting to senesce (yellowing evident).
database_cross_reference: potato_cooperators:4

tuber thickness
type: Class
subclass of: tuber size
created by: Naama
creation date: 2010-05-19T01:14:50Z
database_cross_reference: PATO:0000915
database_cross_reference: PO:0004547
database_cross_reference: PVP:5
has_obo_namespace: solanaceae_phenotype
id: SP:0000233

simple inflorescence
type: Class
subclass of: inflorescence structure - phenotypic values
created by: Naama
creation date: 2010-05-22T02:08:21Z
database_cross_reference: PATO:0001503
database_cross_reference: PO:0001083
database_cross_reference: PO:0009049
has_obo_namespace: solanaceae_phenotype
id: SP:0000234

decumbent
type: Class
subclass of: plant habit phenotypic values
created by: Naama
creation date: 2010-05-24T12:11:36Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000235

plant canopy
type: Class
subclass of: plant habit
created by: Naama
creation date: 2010-05-24T12:13:17Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000236

poor canopy
type: Class
subclass of: plant canopy
created by: Naama
creation date: 2010-05-24T12:13:59Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000237

fair canopy
type: Class
subclass of: plant canopy
created by: Naama
creation date: 2010-05-24T12:13:59Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000238

good canopy
type: Class
subclass of: plant canopy
created by: Naama
creation date: 2010-05-24T12:13:59Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000239

tuber epidermis texture netted
type: Class
subclass of: tuber epidermis texture
definition: Netted skin texture.
created by: Naama
creation date: 2010-05-24T02:24:59Z
database_cross_reference: PATO:0001947
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000240

Axiom
annotated source: tuber epidermis texture netted
annotated property: definition
annotated target: Netted skin texture.
database_cross_reference: NE1014:5

tuber epidermis texture smooth
type: Class
subclass of: tuber epidermis texture
definition: Smooth skin texture.
created by: Naama
creation date: 2010-05-24T02:24:59Z
database_cross_reference: PATO:0000701
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000241

Axiom
annotated source: tuber epidermis texture smooth
annotated property: definition
annotated target: Smooth skin texture.
database_cross_reference: NE1014:8

tuber epidermis texture slight net
type: Class
subclass of: tuber epidermis texture netted
definition: Slight net skin texture.
created by: Naama
creation date: 2010-05-24T02:25:04Z
database_cross_reference: PATO:0001947
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000242

Axiom
annotated source: tuber epidermis texture slight net
annotated property: definition
annotated target: Slight net skin texture.
database_cross_reference: NE1014:6

partial russet
type: Class
subclass of: tuber epidermis texture russet
definition: Partial russet skin texture.
created by: Naama
creation date: 2010-05-24T02:27:57Z
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000243

Axiom
annotated source: partial russet
annotated property: definition
annotated target: Partial russet skin texture.
database_cross_reference: NE1014:1

heavy russet
type: Class
subclass of: tuber epidermis texture russet
definition: Heavy russet skin texture.
created by: Naama
creation date: 2010-05-24T02:27:57Z
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000244

Axiom
annotated source: heavy russet
annotated property: definition
annotated target: Heavy russet skin texture.
database_cross_reference: NE1014:2

moderate russet
type: Class
subclass of: tuber epidermis texture russet
definition: Moderate russet skin texture.
created by: Naama
creation date: 2010-05-24T02:27:57Z
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000245

Axiom
annotated source: moderate russet
annotated property: definition
annotated target: Moderate russet skin texture.
database_cross_reference: NE1014:3

light russet
type: Class
subclass of: tuber epidermis texture russet
definition: Light russet skin texture.
created by: Naama
creation date: 2010-05-24T02:27:57Z
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000246

Axiom
annotated source: light russet
annotated property: definition
annotated target: Light russet skin texture.
database_cross_reference: NE1014:4

tuber epidermis texture moderately smooth
type: Class
subclass of: tuber epidermis texture smooth
definition: Moderately smooth skin texture.
created by: Naama
creation date: 2010-05-24T02:46:16Z
database_cross_reference: PATO:0000701
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000247

Axiom
annotated source: tuber epidermis texture moderately smooth
annotated property: definition
annotated target: Moderately smooth skin texture.
database_cross_reference: NE1014:7

tuber epidermis texture very smooth
type: Class
subclass of: tuber epidermis texture smooth
definition: Very smooth skin texture.
created by: Naama
creation date: 2010-05-24T02:46:16Z
database_cross_reference: PATO:0000701
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000248

Axiom
annotated source: tuber epidermis texture very smooth
annotated property: definition
annotated target: Very smooth skin texture.
database_cross_reference: NE1014:9

tuber cross section vary flat
type: Class
subclass of: tuber cross section
created by: Naama
creation date: 2010-05-24T03:10:05Z
database_cross_reference: NE1014:1
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000249

tuber cross section flat
type: Class
subclass of: tuber cross section
created by: Naama
creation date: 2010-05-24T03:10:05Z
database_cross_reference: NE1014:3
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000250

tuber cross section intermediate/oval
type: Class
subclass of: tuber cross section
created by: Naama
creation date: 2010-05-24T03:10:05Z
database_cross_reference: NE1014:5
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000251

tuber cross section mostly round
type: Class
subclass of: tuber cross section
created by: Naama
creation date: 2010-05-24T03:10:05Z
database_cross_reference: NE1014:7
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000252

tuber cross section round
type: Class
subclass of: tuber cross section
created by: Naama
creation date: 2010-05-24T03:10:05Z
database_cross_reference: NE1014:8
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000253

tuber cross section very round
type: Class
subclass of: tuber cross section
created by: Naama
creation date: 2010-05-24T03:10:05Z
database_cross_reference: NE1014:9
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000254

skin set depth very poor
type: Class
subclass of: tuber epidermis set depth
created by: Naama
creation date: 2010-05-24T03:14:57Z
database_cross_reference: NE1014:1
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000255

skin set depth poor
type: Class
subclass of: tuber epidermis set depth
created by: Naama
creation date: 2010-05-24T03:14:57Z
database_cross_reference: NE1014:3
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000256

skin set depth fair
type: Class
subclass of: tuber epidermis set depth
created by: Naama
creation date: 2010-05-24T03:14:57Z
database_cross_reference: NE1014:5
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000257

skin set depth good
type: Class
subclass of: tuber epidermis set depth
created by: Naama
creation date: 2010-05-24T03:14:57Z
database_cross_reference: NE1014:7
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000258

skin set depth excellent
type: Class
subclass of: tuber epidermis set depth
created by: Naama
creation date: 2010-05-24T03:14:57Z
database_cross_reference: NE1014:9
database_cross_reference: PO:0025048
has_obo_namespace: solanaceae_phenotype
id: SP:0000259

tuber size small
type: Class
subclass of: tuber size index
definition: Small tuber size.
created by: Naama
creation date: 2010-05-25T12:38:06Z
database_cross_reference: PATO:0000587
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000260

Axiom
annotated source: tuber size small
annotated property: definition
annotated target: Small tuber size.
database_cross_reference: NE1014:1

tuber size small-medium
type: Class
subclass of: tuber size index
definition: Small-medium tuber size.
created by: Naama
creation date: 2010-05-25T12:38:06Z
database_cross_reference: PATO:0000587
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000261

Axiom
annotated source: tuber size small-medium
annotated property: definition
annotated target: Small-medium tuber size.
database_cross_reference: NE1014:3

tuber size medium
type: Class
subclass of: tuber size index
definition: Medium tuber size.
created by: Naama
creation date: 2010-05-25T12:38:06Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000262

Axiom
annotated source: tuber size medium
annotated property: definition
annotated target: Medium tuber size.
database_cross_reference: NE1014:5

tuber size medium-large
type: Class
subclass of: tuber size index
definition: Medium-large tuber size.
created by: Naama
creation date: 2010-05-25T12:38:06Z
database_cross_reference: PATO:0000586
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000263

Axiom
annotated source: tuber size medium-large
annotated property: definition
annotated target: Medium-large tuber size.
database_cross_reference: NE1014:7

tuber size large
type: Class
subclass of: tuber size index
definition: Large tuber size.
created by: Naama
creation date: 2010-05-25T12:38:06Z
database_cross_reference: PATO:0000586
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000264

Axiom
annotated source: tuber size large
annotated property: definition
annotated target: Large tuber size.
database_cross_reference: NE1014:9

tuber appearance very poor
type: Class
subclass of: tuber appearance
definition: Very poor tuber appearance.
created by: Naama
creation date: 2010-05-25T01:09:49Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000265

Axiom
annotated source: tuber appearance very poor
annotated property: definition
annotated target: Very poor tuber appearance.
database_cross_reference: NE1014:1

tuber appearance poor
type: Class
subclass of: tuber appearance
definition: Poor tuber appearance.
created by: Naama
creation date: 2010-05-25T01:10:08Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000266

Axiom
annotated source: tuber appearance poor
annotated property: definition
annotated target: Poor tuber appearance.
database_cross_reference: NE1014:3

tuber appearance fair
type: Class
subclass of: tuber appearance
definition: Fair tuber appearance.
created by: Naama
creation date: 2010-05-25T01:10:27Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000267

Axiom
annotated source: tuber appearance fair
annotated property: definition
annotated target: Fair tuber appearance.
database_cross_reference: NE1014:5

tuber appearance good
type: Class
subclass of: tuber appearance
definition: Good tuber appearance.
created by: Naama
creation date: 2010-05-25T01:10:43Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000268

Axiom
annotated source: tuber appearance good
annotated property: definition
annotated target: Good tuber appearance.
database_cross_reference: NE1014:7

tuber appearance excellent
type: Class
subclass of: tuber appearance
created by: Naama
creation date: 2010-05-25T01:10:59Z
database_cross_reference: NE1014:9
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000269

shoot maturity mid-season
type: Class
subclass of: shoot maturity 120 DAP
subclass of: shoot maturity 95DAP
definition: Green vine, done flowering.
created by: Naama
creation date: 2010-05-25T01:31:19Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000270

Axiom
annotated source: shoot maturity mid-season
annotated property: definition
annotated target: Green vine, done flowering.
database_cross_reference: potato_cooperators:6

shoot maturity late
type: Class
subclass of: shoot maturity 120 DAP
subclass of: shoot maturity 95DAP
definition: Green Vine; Some flowers yet in bloom.
created by: Naama
creation date: 2010-05-25T01:31:45Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000271

Axiom
annotated source: shoot maturity late
annotated property: definition
annotated target: Green Vine; Some flowers yet in bloom.
database_cross_reference: potato_cooperators:7

shoot maturity very late
type: Class
subclass of: shoot maturity 120 DAP
subclass of: shoot maturity 95DAP
definition: Full bloom with buds evident as well.
created by: Naama
creation date: 2010-05-25T01:32:07Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000272

Axiom
annotated source: shoot maturity very late
annotated property: definition
annotated target: Full bloom with buds evident as well.
database_cross_reference: potato_cooperators:9

tuber skin color white
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T01:45:53Z
database_cross_reference: PATO:0000323
database_cross_reference: PO:0025048
database_cross_reference: PVP:1
has_obo_namespace: solanaceae_phenotype
id: SP:0000273

tuber skin color light yellow
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T01:46:14Z
database_cross_reference: PATO:0001264
database_cross_reference: PO:0025048
database_cross_reference: PVP:3
has_obo_namespace: solanaceae_phenotype
id: SP:0000274

tuber skin color yellow
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T01:47:11Z
database_cross_reference: PATO:0000324
database_cross_reference: PO:0025048
database_cross_reference: PVP:3
has_obo_namespace: solanaceae_phenotype
id: SP:0000275

tuber skin color pale yellow
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T03:06:13Z
database_cross_reference: PATO:0001286
database_cross_reference: PO:0025048
database_cross_reference: PVP:4
has_obo_namespace: solanaceae_phenotype
has_related_synonym: buff
id: SP:0000276

tuber skin color pale brown
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T03:07:50Z
database_cross_reference: PATO:0001268
database_cross_reference: PO:0025048
database_cross_reference: PVP:5
has_obo_namespace: solanaceae_phenotype
has_related_synonym: tan
id: SP:0000277

tuber skin color brown
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T03:09:11Z
database_cross_reference: PATO:0000952
database_cross_reference: PO:0025048
database_cross_reference: PVP:6
has_obo_namespace: solanaceae_phenotype
id: SP:0000278

tuber skin color pink
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T03:09:57Z
database_cross_reference: PATO:0000954
database_cross_reference: PO:0025048
database_cross_reference: PVP:7
has_obo_namespace: solanaceae_phenotype
id: SP:0000279

tuber skin color red
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T03:10:27Z
database_cross_reference: PATO:0000322
database_cross_reference: PO:0025048
database_cross_reference: PVP:8
has_obo_namespace: solanaceae_phenotype
id: SP:0000280

tuber skin color maroon
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T03:10:54Z
database_cross_reference: PATO:0001426
database_cross_reference: PO:0025048
database_cross_reference: PVP:9
has_obo_namespace: solanaceae_phenotype
has_related_synonym: purplish red
id: SP:0000281

tuber skin color purple
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T03:13:00Z
database_cross_reference: PATO:0000951
database_cross_reference: PO:0025048
database_cross_reference: PVP:10
has_obo_namespace: solanaceae_phenotype
id: SP:0000282

tuber skin color dark purple
type: Class
subclass of: tuber epidermis color
created by: Naama
creation date: 2010-05-25T03:14:06Z
database_cross_reference: PATO:0001259
database_cross_reference: PO:0025048
database_cross_reference: PVP:11
has_obo_namespace: solanaceae_phenotype
id: SP:0000283

tuber thickness round
type: Class
subclass of: tuber thickness
created by: Naama
creation date: 2010-05-25T03:17:39Z
database_cross_reference: PO:0004547
database_cross_reference: PVP:1
has_obo_namespace: solanaceae_phenotype
id: SP:0000284

tuber thickness medium
type: Class
subclass of: tuber thickness
created by: Naama
creation date: 2010-05-25T03:19:04Z
database_cross_reference: PO:0004547
database_cross_reference: PVP:2
has_obo_namespace: solanaceae_phenotype
id: SP:0000285

tuber thickness slightly flattened
type: Class
subclass of: tuber thickness
created by: Naama
creation date: 2010-05-25T03:19:19Z
database_cross_reference: PO:0004547
database_cross_reference: PVP:3
has_obo_namespace: solanaceae_phenotype
id: SP:0000286

tuber thickness flattened
type: Class
subclass of: tuber thickness
created by: Naama
creation date: 2010-05-25T03:19:41Z
database_cross_reference: PO:0004547
database_cross_reference: PVP:4
has_obo_namespace: solanaceae_phenotype
id: SP:0000287

tuber flesh color brown
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T03:22:15Z
database_cross_reference: PATO:0000952
database_cross_reference: PO:0025038
database_cross_reference: PVP:6
has_obo_namespace: solanaceae_phenotype
id: SP:0000288

tuber flesh color light yellow
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:01:55Z
database_cross_reference: PATO:0001264
database_cross_reference: PO:0025038
database_cross_reference: PVP:2
database_cross_reference: solcap:7
has_obo_namespace: solanaceae_phenotype
id: SP:0000289

tuber flesh color maroon
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:02:30Z
database_cross_reference: PATO:0001426
database_cross_reference: PO:0025038
database_cross_reference: PVP:9
has_obo_namespace: solanaceae_phenotype
has_related_synonym: purplish red
id: SP:0000290

tuber flesh color pale brown
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:03:05Z
database_cross_reference: PATO:0001268
database_cross_reference: PO:0025038
database_cross_reference: PVP:5
has_obo_namespace: solanaceae_phenotype
has_related_synonym: tan
id: SP:0000291

tuber flesh color dark purple
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:03:46Z
database_cross_reference: PATO:0001259
database_cross_reference: PO:0025038
database_cross_reference: PVP:11
has_obo_namespace: solanaceae_phenotype
id: SP:0000292

tuber flesh color purple
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:05:33Z
database_cross_reference: PATO:0000951
database_cross_reference: PO:0025038
database_cross_reference: PVP:10
database_cross_reference: solcap:2
has_obo_namespace: solanaceae_phenotype
id: SP:0000293

tuber flesh color pale yellow
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:06:29Z
database_cross_reference: PATO:0001286
database_cross_reference: PO:0025038
database_cross_reference: PVP:4
database_cross_reference: solcap:8
has_obo_namespace: solanaceae_phenotype
has_related_synonym: buff
id: SP:0000294

tuber flesh color pink
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:07:00Z
database_cross_reference: PATO:0000954
database_cross_reference: PO:0025038
database_cross_reference: PVP:7
database_cross_reference: solcap:4
has_obo_namespace: solanaceae_phenotype
id: SP:0000295

tuber flesh color red
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:07:47Z
database_cross_reference: PATO:0000322
database_cross_reference: PO:0025038
database_cross_reference: PVP:8
database_cross_reference: solcap:3
has_obo_namespace: solanaceae_phenotype
id: SP:0000296

tuber flesh color white
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:08:41Z
database_cross_reference: PATO:0000323
database_cross_reference: PO:0025038
database_cross_reference: PVP:1
database_cross_reference: solcap:9
has_obo_namespace: solanaceae_phenotype
id: SP:0000297

tuber flesh color yellow
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2010-05-25T11:09:32Z
database_cross_reference: PATO:0000324
database_cross_reference: PO:0025038
database_cross_reference: PVP:3
database_cross_reference: solcap:6
has_obo_namespace: solanaceae_phenotype
id: SP:0000298

tuber eye depth protruding
type: Class
subclass of: tuber eye depth
definition: Protruding tuber eyes.
created by: Naama
creation date: 2010-05-25T11:44:29Z
database_cross_reference: PATO:0001598
database_cross_reference: PO:0025042
has_obo_namespace: solanaceae_phenotype
id: SP:0000299

Axiom
annotated source: tuber eye depth protruding
annotated property: definition
annotated target: Protruding tuber eyes.
database_cross_reference: PVP:1

tuber eye depth shallow
type: Class
subclass of: tuber eye depth
definition: Shallow tuber eyes.
created by: Naama
creation date: 2010-05-26T10:36:18Z
database_cross_reference: PATO:0001692
database_cross_reference: PO:0025042
has_obo_namespace: solanaceae_phenotype
id: SP:0000300

Axiom
annotated source: tuber eye depth shallow
annotated property: definition
annotated target: Shallow tuber eyes.
database_cross_reference: PVP:3

tuber eye depth intermediate
type: Class
subclass of: tuber eye depth
definition: Intermediate tuber eye depth.
created by: Naama
creation date: 2010-05-26T10:37:14Z
database_cross_reference: PATO:0001596
database_cross_reference: PO:0025042
has_obo_namespace: solanaceae_phenotype
id: SP:0000301

Axiom
annotated source: tuber eye depth intermediate
annotated property: definition
annotated target: Intermediate tuber eye depth.
database_cross_reference: PVP:5

tuber eye depth deep
type: Class
subclass of: tuber eye depth
definition: Deep tuber eyes.
created by: Naama
creation date: 2010-05-26T10:38:50Z
database_cross_reference: PATO:0001666
database_cross_reference: PO:0025042
has_obo_namespace: solanaceae_phenotype
id: SP:0000302

Axiom
annotated source: tuber eye depth deep
annotated property: definition
annotated target: Deep tuber eyes.
database_cross_reference: PVP:7

tuber eye depth very deep
type: Class
subclass of: tuber eye depth
definition: Very deep tuber eyes.
created by: Naama
creation date: 2010-05-26T10:39:15Z
database_cross_reference: PATO:0001666
database_cross_reference: PO:0025042
has_obo_namespace: solanaceae_phenotype
id: SP:0000303

Axiom
annotated source: tuber eye depth very deep
annotated property: definition
annotated target: Very deep tuber eyes.
database_cross_reference: PVP:9

heat sprout rating swollen eyes
type: Class
subclass of: heat sprout rating
created by: Naama
creation date: 2010-05-26T10:52:46Z
database_cross_reference: potato_cooperators:2
has_obo_namespace: solanaceae_phenotype
id: SP:0000304

heat sprout rating sprouts caliber 1/4 inch
type: Class
subclass of: heat sprout rating
created by: Naama
creation date: 2010-05-26T10:53:40Z
database_cross_reference: potato_cooperators:3
has_obo_namespace: solanaceae_phenotype
id: SP:0000305

heat sprout rating sprouts caliber 1/2 inch
type: Class
subclass of: heat sprout rating
created by: Naama
creation date: 2010-05-26T10:54:11Z
database_cross_reference: potato_cooperators:4
has_obo_namespace: solanaceae_phenotype
id: SP:0000306

heat sprout rating sprouts caliber 1 inch
type: Class
subclass of: heat sprout rating
created by: Naama
creation date: 2010-05-26T10:54:25Z
database_cross_reference: potato_cooperators:5
has_obo_namespace: solanaceae_phenotype
id: SP:0000307

heat sprout rating sprouts caliber 2 inches
type: Class
subclass of: heat sprout rating
created by: Naama
creation date: 2010-05-26T10:54:42Z
database_cross_reference: potato_cooperators:6
has_obo_namespace: solanaceae_phenotype
id: SP:0000308

heat sprout rating sprouts caliber 3 inches
type: Class
subclass of: heat sprout rating
created by: Naama
creation date: 2010-05-26T10:55:00Z
database_cross_reference: potato_cooperators:7
has_obo_namespace: solanaceae_phenotype
id: SP:0000309

heat sprout rating chain tubers
type: Class
subclass of: heat sprout rating
created by: Naama
creation date: 2010-05-26T10:55:25Z
database_cross_reference: potato_cooperators:9
has_obo_namespace: solanaceae_phenotype
id: SP:0000310

tuber epidermis pigment pattern eyes
type: Class
subclass of: tuber epidermis pigment pattern
definition: Tuber skin pigment pattern has eyes. See potato cooperators guide Figure 13.
created by: Naama
creation date: 2010-05-26T10:57:25Z
database_cross_reference: PO:0025048
database_cross_reference: potato_cooperators:1
has_obo_namespace: solanaceae_phenotype
id: SP:0000311

Axiom
annotated source: tuber epidermis pigment pattern eyes
annotated property: definition
annotated target: Tuber skin pigment pattern has eyes. See potato cooperators guide Figure 13.
database_cross_reference: potato_cooperators:fig13

tuber epidermis pigment pattern eyebrows
type: Class
subclass of: tuber epidermis pigment pattern
definition: Tuber skin pigment pattern has eyebrows. See potato cooperators guide Figure 13.
created by: Naama
creation date: 2010-05-26T10:59:31Z
database_cross_reference: PO:0025048
database_cross_reference: potato_cooperators:2
has_obo_namespace: solanaceae_phenotype
id: SP:0000312

Axiom
annotated source: tuber epidermis pigment pattern eyebrows
annotated property: definition
annotated target: Tuber skin pigment pattern has eyebrows. See potato cooperators guide Figure 13.
database_cross_reference: potato_cooperators:fig13

tuber epidermis pigment pattern splashed
type: Class
subclass of: tuber epidermis pigment pattern
definition: Tuber skin pigment pattern is splashed. See potato cooperators guide Figure 13.
created by: Naama
creation date: 2010-05-26T11:06:50Z
database_cross_reference: PO:0025048
database_cross_reference: potato_cooperators:3
has_obo_namespace: solanaceae_phenotype
id: SP:0000313

Axiom
annotated source: tuber epidermis pigment pattern splashed
annotated property: definition
annotated target: Tuber skin pigment pattern is splashed. See potato cooperators guide Figure 13.
database_cross_reference: potato_cooperators:fig13

tuber epidermis pigment pattern scattered
type: Class
subclass of: tuber epidermis pigment pattern
definition: Tuber skin pigment pattern is scattered See potato cooperators guide Figure 13.
created by: Naama
creation date: 2010-05-26T11:08:01Z
database_cross_reference: PO:0025048
database_cross_reference: potato_cooperators:4
has_obo_namespace: solanaceae_phenotype
id: SP:0000314

Axiom
annotated source: tuber epidermis pigment pattern scattered
annotated property: definition
annotated target: Tuber skin pigment pattern is scattered See potato cooperators guide Figure 13.
database_cross_reference: potato_cooperators:fig13

tuber epidermis pigment pattern spectacled
type: Class
subclass of: tuber epidermis pigment pattern
definition: Tuber skin pigment pattern is scattered See potato cooperators guide Figure 13.
created by: Naama
creation date: 2010-05-26T11:08:25Z
database_cross_reference: PO:0025048
database_cross_reference: potato_cooperators:5
has_obo_namespace: solanaceae_phenotype
id: SP:0000315

Axiom
annotated source: tuber epidermis pigment pattern spectacled
annotated property: definition
annotated target: Tuber skin pigment pattern is scattered See potato cooperators guide Figure 13.
database_cross_reference: potato_cooperators:fig13

tuber epidermis pigment pattern stippled
type: Class
subclass of: tuber epidermis pigment pattern
definition: Tuber skin pigment pattern is stippled See potato cooperators guide Figure 13.
created by: Naama
creation date: 2010-05-26T11:10:42Z
database_cross_reference: PO:0025048
database_cross_reference: potato_cooperators:6
has_obo_namespace: solanaceae_phenotype
id: SP:0000316

Axiom
annotated source: tuber epidermis pigment pattern stippled
annotated property: definition
annotated target: Tuber skin pigment pattern is stippled See potato cooperators guide Figure 13.
database_cross_reference: potato_cooperators:fig13

tuber shape compressed
type: Class
subclass of: tuber shape
definition: Compressed shape. See potato cooperators guide, Figure 14.
created by: Naama
creation date: 2010-05-26T12:18:26Z
database_cross_reference: PATO:0001840
database_cross_reference: PO:0004547
database_cross_reference: potato_cooperators:1
has_obo_namespace: solanaceae_phenotype
id: SP:0000317

Axiom
annotated source: tuber shape compressed
annotated property: definition
annotated target: Compressed shape. See potato cooperators guide, Figure 14.
database_cross_reference: potato_cooperators:fig14

tuber shape round
type: Class
subclass of: tuber shape
definition: Round shape. See potato cooperators guide, Figure 14.
created by: Naama
creation date: 2010-05-26T12:23:21Z
database_cross_reference: PATO:0000411
database_cross_reference: PO:0004547
database_cross_reference: potato_cooperators:2
has_obo_namespace: solanaceae_phenotype
id: SP:0000318

Axiom
annotated source: tuber shape round
annotated property: definition
annotated target: Round shape. See potato cooperators guide, Figure 14.
database_cross_reference: potato_cooperators:fig14

tuber shape oval
type: Class
subclass of: tuber shape
definition: Oval shape. See potato cooperators guide, Figure 14.
created by: Naama
creation date: 2010-05-26T12:25:26Z
database_cross_reference: PATO:0001891
database_cross_reference: PO:0004547
database_cross_reference: potato_cooperators:3
has_obo_namespace: solanaceae_phenotype
has_related_synonym: ovate
id: SP:0000319

Axiom
annotated source: tuber shape oval
annotated property: definition
annotated target: Oval shape. See potato cooperators guide, Figure 14.
database_cross_reference: potato_cooperators:fig14

tuber shape long
type: Class
subclass of: tuber shape
definition: Long tuber shape. See potato cooperators guide, Figure 14.
created by: Naama
creation date: 2010-05-26T12:26:01Z
database_cross_reference: PO:0004547
database_cross_reference: potato_cooperators:5
has_obo_namespace: solanaceae_phenotype
id: SP:0000320

Axiom
annotated source: tuber shape long
annotated property: definition
annotated target: Long tuber shape. See potato cooperators guide, Figure 14.
database_cross_reference: potato_cooperators:fig14

tuber shape oblong
type: Class
subclass of: tuber shape
definition: Elongated tuber shape. See potato cooperators guide, Figure 14.
created by: Naama
creation date: 2010-05-26T12:26:59Z
database_cross_reference: PATO:0000946
database_cross_reference: PO:0004547
database_cross_reference: potato_cooperators:4
has_obo_namespace: solanaceae_phenotype
id: SP:0000321

Axiom
annotated source: tuber shape oblong
annotated property: definition
annotated target: Elongated tuber shape. See potato cooperators guide, Figure 14.
database_cross_reference: potato_cooperators:fig14

tuber size index
type: Class
subclass of: tuber size
created by: Naama
creation date: 2010-05-26T03:32:52Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000322

heat sprout rating none
type: Class
subclass of: heat sprout rating
created by: Naama
creation date: 2010-05-28T02:26:47Z
database_cross_reference: potato_cooperators:1
has_obo_namespace: solanaceae_phenotype
id: SP:0000323

heat sprout rating new top growth
type: Class
subclass of: heat sprout rating
created by: Naama
creation date: 2010-05-28T02:30:09Z
database_cross_reference: potato_cooperators:8
has_obo_namespace: solanaceae_phenotype
id: SP:0000324

shoot maturity very early 2
type: Class
subclass of: shoot maturity 95DAP
subclass of: shoot maturity very early
definition: Between very early and early.
created by: Naama
creation date: 2010-06-02T01:34:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000325

Axiom
annotated source: shoot maturity very early 2
annotated property: definition
annotated target: Between very early and early.
database_cross_reference: potato_cooperators:2

shoot maturity very early 3
type: Class
subclass of: shoot maturity 95DAP
subclass of: shoot maturity very early
definition: Between very early and early.
created by: Naama
creation date: 2010-06-02T01:35:11Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000326

Axiom
annotated source: shoot maturity very early 3
annotated property: definition
annotated target: Between very early and early.
database_cross_reference: potato_cooperators:3

shoot maturity mid-season 5
type: Class
subclass of: shoot maturity 95DAP
subclass of: shoot maturity mid-season
definition: Between early and mid-season.
created by: Naama
creation date: 2010-06-02T01:41:17Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000327

Axiom
annotated source: shoot maturity mid-season 5
annotated property: definition
annotated target: Between early and mid-season.
database_cross_reference: potato_cooperators:5

shoot maturity late 8
type: Class
subclass of: shoot maturity 95DAP
subclass of: shoot maturity late
definition: Between late and very late.
created by: Naama
creation date: 2010-06-02T01:41:57Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000328

Axiom
annotated source: shoot maturity late 8
annotated property: definition
annotated target: Between late and very late.
database_cross_reference: potato_cooperators:8

erect 1
type: Class
subclass of: erect
definition: Erect plant growth habit. close to 90 degrees.
created by: Naama
creation date: 2010-06-02T01:44:31Z
database_cross_reference: PATO:0000622
has_exact_synonym: upright
has_obo_namespace: solanaceae_phenotype
id: SP:0000329

Axiom
annotated source: erect 1
annotated property: definition
annotated target: Erect plant growth habit. close to 90 degrees.
database_cross_reference: PVP:1

erect 2
type: Class
subclass of: erect
definition: Erect plant growth habit. Between 90-45 degrees
created by: Naama
creation date: 2010-06-02T01:45:17Z
database_cross_reference: PATO:0000622
has_exact_synonym: upright
has_obo_namespace: solanaceae_phenotype
id: SP:0000330

Axiom
annotated source: erect 2
annotated property: definition
annotated target: Erect plant growth habit. Between 90-45 degrees
database_cross_reference: PVP:2

semi-erect 4
type: Class
subclass of: semi erect
definition: Semi-erect plant growth habit. 45 degrees.
created by: Naama
creation date: 2010-06-02T01:47:35Z
database_cross_reference: PATO:0000622
has_exact_synonym: upright
has_obo_namespace: solanaceae_phenotype
id: SP:0000331

Axiom
annotated source: semi-erect 4
annotated property: definition
annotated target: Semi-erect plant growth habit. 45 degrees.
database_cross_reference: PVP:4

spreading 6
type: Class
subclass of: spreading
definition: Spreading plant growth habit. Less than 30 degrees
created by: Naama
creation date: 2010-06-02T01:49:13Z
database_cross_reference: PATO:0001855
has_exact_synonym: upright
has_obo_namespace: solanaceae_phenotype
id: SP:0000332

Axiom
annotated source: spreading 6
annotated property: definition
annotated target: Spreading plant growth habit. Less than 30 degrees
database_cross_reference: PVP:6

spreading 8
type: Class
subclass of: spreading
definition: Spreading plant growth habit. Less than 15 degrees
created by: Naama
creation date: 2010-06-02T01:51:05Z
database_cross_reference: PATO:0001855
has_exact_synonym: upright
has_obo_namespace: solanaceae_phenotype
id: SP:0000333

Axiom
annotated source: spreading 8
annotated property: definition
annotated target: Spreading plant growth habit. Less than 15 degrees
database_cross_reference: PVP:8

spreading 9
type: Class
subclass of: spreading
definition: Spreading plant growth habit. Zero degrees.
created by: Naama
creation date: 2010-06-02T01:51:45Z
database_cross_reference: PATO:0001855
has_exact_synonym: upright
has_obo_namespace: solanaceae_phenotype
id: SP:0000334

Axiom
annotated source: spreading 9
annotated property: definition
annotated target: Spreading plant growth habit. Zero degrees.
database_cross_reference: PVP:9

tuber size small 2
type: Class
subclass of: tuber size small
definition: Small to small-medium tuber size.
created by: Naama
creation date: 2010-06-02T11:13:04Z
database_cross_reference: PATO:0000587
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000335

Axiom
annotated source: tuber size small 2
annotated property: definition
annotated target: Small to small-medium tuber size.
database_cross_reference: NE1014:2

tuber size small 4
type: Class
subclass of: tuber size small-medium
definition: Small-medium to medium tuber size.
created by: Naama
creation date: 2010-06-02T11:13:58Z
database_cross_reference: PATO:0000587
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000336

Axiom
annotated source: tuber size small 4
annotated property: definition
annotated target: Small-medium to medium tuber size.
database_cross_reference: NE1014:4

tuber size medium 6
type: Class
subclass of: tuber size medium
definition: Medium to medium-large tuber size.
created by: Naama
creation date: 2010-06-02T11:14:57Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000337

Axiom
annotated source: tuber size medium 6
annotated property: definition
annotated target: Medium to medium-large tuber size.
database_cross_reference: NE1014:6

tuber size medium-large 8
type: Class
subclass of: tuber size medium-large
definition: Medium-large to large tuber size.
created by: Naama
creation date: 2010-06-02T11:16:02Z
database_cross_reference: PATO:0000586
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000338

Axiom
annotated source: tuber size medium-large 8
annotated property: definition
annotated target: Medium-large to large tuber size.
database_cross_reference: NE1014:8

tuber appearance very poor 2
type: Class
subclass of: tuber appearance very poor
definition: Very poor to poor tuber appearance.
created by: Naama
creation date: 2010-06-04T02:39:11Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000339

Axiom
annotated source: tuber appearance very poor 2
annotated property: definition
annotated target: Very poor to poor tuber appearance.
database_cross_reference: NE1014:2

tuber appearance good 8
type: Class
subclass of: tuber appearance good
definition: Good to excellent tuber appearance.
created by: Naama
creation date: 2010-06-04T02:40:33Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000340

Axiom
annotated source: tuber appearance good 8
annotated property: definition
annotated target: Good to excellent tuber appearance.
database_cross_reference: NE1014:8

tuber appearance poor 4
type: Class
subclass of: tuber appearance poor
definition: Poor to fair tuber appearance.
created by: Naama
creation date: 2010-06-04T02:40:54Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000341

Axiom
annotated source: tuber appearance poor 4
annotated property: definition
annotated target: Poor to fair tuber appearance.
database_cross_reference: NE1014:4

tuber appearance fair 6
type: Class
subclass of: tuber appearance fair
definition: Fair to good tuber appearance.
created by: Naama
creation date: 2010-06-04T02:42:42Z
database_cross_reference: PO:0004547
has_obo_namespace: solanaceae_phenotype
id: SP:0000342

Axiom
annotated source: tuber appearance fair 6
annotated property: definition
annotated target: Fair to good tuber appearance.
database_cross_reference: NE1014:6

hypocotyl
type: Class
subclass of: Restriction
  on property: part of
  some values from: seedling
created by: Naama
creation date: 2010-07-15T03:19:16Z
database_cross_reference: PO:0007043
has_obo_namespace: solanaceae_phenotype
id: SP:0000343

hypocotyl anthocyanin content
type: Class
subclass of: anthocyanin content
subclass of: Restriction
  on property: part of
  some values from: hypocotyl
created by: Naama
creation date: 2010-07-15T03:25:42Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000344

titratable acids
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: citric acid
definition: Grams of citric acid per 100ml. Method for measuring is NaOH titration.
created by: Naama
creation date: 2010-07-15T03:39:19Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000345

Axiom
annotated source: titratable acids
annotated property: definition
annotated target: Grams of citric acid per 100ml. Method for measuring is NaOH titration.
database_cross_reference: SolCAP:DF

fruit color uniformity external
type: Class
subclass of: fruit color uniformity
subclass of: epicarp color
definition: The proportion of the 2D area of the red color epicarp out of the total epicarp area visible from a top view of the proximal fruit end.
created by: Naama
creation date: 2010-07-15T03:45:08Z
has_exact_synonym: epicarp color uniformity
has_obo_namespace: solanaceae_phenotype
id: SP:0000346

Axiom
annotated source: fruit color uniformity external
annotated property: definition
annotated target: The proportion of the 2D area of the red color epicarp out of the total epicarp area visible from a top view of the proximal fruit end.
database_cross_reference: SGN:EVDK

Axiom
annotated source: fruit color uniformity external
annotated property: has_exact_synonym
annotated target: epicarp color uniformity
database_cross_reference: SGN:NM

fruit color uniformity internal
type: Class
subclass of: fruit color uniformity
subclass of: endocarp color
created by: Naama
creation date: 2010-07-15T03:47:35Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000347

internal color uniformity cross section
type: Class
subclass of: fruit color uniformity internal
created by: Naama
creation date: 2010-07-15T03:52:29Z
has_obo_namespace: solanaceae_phenotype
has_related_synonym: internal color uniformity latitudinal cross section
id: SP:0000348

Axiom
annotated source: internal color uniformity cross section
annotated property: has_related_synonym
annotated target: internal color uniformity latitudinal cross section
database_cross_reference: SGN:NM

internal color uniformity longitudinal
type: Class
subclass of: fruit color uniformity internal
created by: Naama
creation date: 2010-07-15T03:52:29Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000349

fruit color uniformity cross section percent red
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: internal color uniformity cross section
definition: Percentage of surface area with hue angle between 0-50 on a 0-360 scale.
created by: Naama
creation date: 2010-07-15T04:00:40Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000350

Axiom
annotated source: fruit color uniformity cross section percent red
annotated property: definition
annotated target: Percentage of surface area with hue angle between 0-50 on a 0-360 scale.
database_cross_reference: SGN:DF

fruit color uniformity cross section percent yellow
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: internal color uniformity cross section
definition: Percentage of surface area with hue angle between 70-100 on a 0-360 scale.
created by: Naama
creation date: 2010-07-15T04:00:40Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000351

Axiom
annotated source: fruit color uniformity cross section percent yellow
annotated property: definition
annotated target: Percentage of surface area with hue angle between 70-100 on a 0-360 scale.
database_cross_reference: SGN:DF

Cross section average RGB red
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: endocarp RGB-scale color
definition: Measurement of the color red of the cross section on RGB scale.
created by: Naama
creation date: 2010-07-15T04:07:07Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000352

Axiom
annotated source: Cross section average RGB red
annotated property: definition
annotated target: Measurement of the color red of the cross section on RGB scale.
database_cross_reference: SGN:DF

endocarp cross section color
type: Class
subclass of: endocarp color
created by: Naama
creation date: 2010-07-15T04:10:25Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000353

endocarp longitudinal section
type: Class
subclass of: endocarp color
created by: Naama
creation date: 2010-07-15T04:10:25Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000354

Cross section average RGB green
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: endocarp RGB-scale color
definition: Measurement of the color green of the cross section on RGB scale.
created by: Naama
creation date: 2010-07-15T04:10:39Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000355

Axiom
annotated source: Cross section average RGB green
annotated property: definition
annotated target: Measurement of the color green of the cross section on RGB scale.
database_cross_reference: SGN:DF

Cross section average RGB blue
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: endocarp RGB-scale color
definition: Measurement of the color blue of the cross section on RGB scale.
created by: Naama
creation date: 2010-07-15T04:10:55Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000356

Axiom
annotated source: Cross section average RGB blue
annotated property: definition
annotated target: Measurement of the color blue of the cross section on RGB scale.
database_cross_reference: SGN:DF

Cross section average L value
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: endocarp Lab-scale color
definition: THe average L value of all the pixels in CIELab color space.
created by: Naama
creation date: 2010-07-15T04:12:02Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000357

Axiom
annotated source: Cross section average L value
annotated property: definition
annotated target: THe average L value of all the pixels in CIELab color space.
database_cross_reference: JASHS:(2008) 133(4):579-586

Cross section average 'a' value
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: endocarp Lab-scale color
definition: The average 'a' value of all the pixels in CIELab color space.
created by: Naama
creation date: 2010-07-15T04:16:45Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000358

Axiom
annotated source: Cross section average 'a' value
annotated property: definition
annotated target: The average 'a' value of all the pixels in CIELab color space.
database_cross_reference: JASHS:(2008) 133(4):579-586

Cross section average 'b' value
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: endocarp Lab-scale color
definition: THe average 'b' value of all the pixels in CIELab color space.
created by: Naama
creation date: 2010-07-15T04:17:20Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000359

Axiom
annotated source: Cross section average 'b' value
annotated property: definition
annotated target: THe average 'b' value of all the pixels in CIELab color space.
database_cross_reference: JASHS:(2008) 133(4):579-586

Cross section average luminosity
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: endocarp cross section color
definition: A measure of brightness. Average luminosity of all the pixels in the cross section. Luminosity = (maxCol + minCol) * 240/(2* 255) where maxCol is the highest of the RGB values, and minCol is the lowest value per pixel.
created by: Naama
creation date: 2010-07-15T04:20:01Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000360

Axiom
annotated source: Cross section average luminosity
annotated property: definition
annotated target: A measure of brightness. Average luminosity of all the pixels in the cross section. Luminosity = (maxCol + minCol) * 240/(2* 255) where maxCol is the highest of the RGB values, and minCol is the lowest value per pixel.
database_cross_reference: JASHS:(2008) 133(4):579-586

Cross section average hue
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: endocarp cross section color
definition: Hue is a measure of color in CIELab colorspace. For 'a' values > 0, hue is 180/pi * cos[a / chroma]. For 'a' values < 0 , hues is 360 - {180/pi * acos[a / chroma] }.
created by: Naama
creation date: 2010-07-15T04:23:43Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000361

Axiom
annotated source: Cross section average hue
annotated property: definition
annotated target: Hue is a measure of color in CIELab colorspace. For 'a' values > 0, hue is 180/pi * cos[a / chroma]. For 'a' values < 0 , hues is 360 - {180/pi * acos[a / chroma] }.
database_cross_reference: JASHS:(2008) 133(4):579-586

Cross section average chroma
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: endocarp cross section color
definition: Chroma is a measure of saturation in CIELab colorspace. Chroma is the square root of (a^2 + b^2).
created by: Naama
creation date: 2010-07-15T04:27:15Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000362

Axiom
annotated source: Cross section average chroma
annotated property: definition
annotated target: Chroma is a measure of saturation in CIELab colorspace. Chroma is the square root of (a^2 + b^2).
database_cross_reference: JASHS:(2008) 133(4):579-586

flower fasciation
type: Class
subclass of: flower morphology
created by: Naama
creation date: 2010-07-19T10:27:21Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000363

peduncle
type: Class
subclass of: inflorescence
definition: The stalk of an inflorescence; that part of the inflorescence below the first flower or inflorescence branch and above the last foliage leaf/pair of foliage leaves.
created by: Naama
creation date: 2010-07-19T10:44:41Z
database_cross_reference: PO:0009053
has_obo_namespace: solanaceae_phenotype
has_related_synonym: inflorescence abscission layer
id: SP:0000364

Axiom
annotated source: peduncle
annotated property: definition
annotated target: The stalk of an inflorescence; that part of the inflorescence below the first flower or inflorescence branch and above the last foliage leaf/pair of foliage leaves.
database_cross_reference: PO:0009053

fruit ripening timing
type: Class
subclass of: fruit ripening
created by: Naama
creation date: 2010-07-19T11:25:30Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000365

days to fruit ripening
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit ripening timing
created by: Naama
creation date: 2010-07-19T11:26:41Z
has_obo_namespace: solanaceae_phenotype
has_related_synonym: days to fruit maturity
id: SP:0000366

distal fruit end scar
type: Class
subclass of: Restriction
  on property: part of
  some values from: distal fruit end shape
created by: Naama
creation date: 2010-07-19T11:30:20Z
has_obo_namespace: solanaceae_phenotype
has_related_synonym: blossom scar
id: SP:0000367

distal fruit end scar size
type: Class
subclass of: distal fruit end scar
created by: Naama
creation date: 2010-07-19T11:31:07Z
has_exact_synonym: blossom scar size
has_obo_namespace: solanaceae_phenotype
id: SP:0000368

proximal angle micro 2%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end angle
definition: The angle between best-fit lines drawn through the fruit perimeter on either side of the proximal end point. The Micro Distance setting determines the percentage of the perimeter from the proximal end point at which to center the linear regression points used to find the best-fit line. The points comprising 1% of the perimeter on either side of that center point are used in the regression.
created by: Naama
creation date: 2010-07-19T12:39:49Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000369

Axiom
annotated source: proximal angle micro 2%
annotated property: definition
annotated target: The angle between best-fit lines drawn through the fruit perimeter on either side of the proximal end point. The Micro Distance setting determines the percentage of the perimeter from the proximal end point at which to center the linear regression points used to find the best-fit line. The points comprising 1% of the perimeter on either side of that center point are used in the regression.
database_cross_reference: SGN:EVDK

proximal angle macro 20%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end angle
definition: The angle between best-fit lines drawn through the fruit perimeter on either side of the proximal end point. The Macro Distance setting determines the percentage of the perimeter from the proximal end point at which to center the linear regression points used to find the best-fit line. The points comprising 5% of the perimeter on either side of that center point are used in the regression.
created by: Naama
creation date: 2010-07-19T12:40:13Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000370

Axiom
annotated source: proximal angle macro 20%
annotated property: definition
annotated target: The angle between best-fit lines drawn through the fruit perimeter on either side of the proximal end point. The Macro Distance setting determines the percentage of the perimeter from the proximal end point at which to center the linear regression points used to find the best-fit line. The points comprising 5% of the perimeter on either side of that center point are used in the regression.
database_cross_reference: SGN:EVDK

pericarp
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit
created by: Naama
creation date: 2010-07-19T01:12:38Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000371

pericarp thickness, calculation in centimetes
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: pericarp
definition: Pericarp thickness in cm.
created by: Naama
creation date: 2010-07-19T01:14:10Z
has_obo_namespace: solanaceae_phenotype
has_related_synonym: pericarp width
id: SP:0000372

Axiom
annotated source: pericarp thickness, calculation in centimetes
annotated property: definition
annotated target: Pericarp thickness in cm.
database_cross_reference: SGN:EVDK

fruit anthocyanin content
type: Class
subclass of: anthocyanin content
subclass of: fruit metabolites
created by: Naama
creation date: 2010-09-17T03:40:45Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000373

Cotyledon
type: Class
subclass of: Restriction
  on property: part of
  some values from: seedling
created by: Naama
creation date: 2011-01-17T11:45:36Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000374

cotyledon color
type: Class
subclass of: Restriction
  on property: part of
  some values from: Cotyledon
created by: Naama
creation date: 2011-01-17T11:47:14Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000375

cotyledon number
type: Class
subclass of: Restriction
  on property: part of
  some values from: Cotyledon
created by: Naama
creation date: 2011-01-17T11:47:14Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000376

cotyledon size
type: Class
subclass of: Restriction
  on property: part of
  some values from: Cotyledon
created by: Naama
creation date: 2011-01-17T11:47:14Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000377

cotyledon morphology
type: Class
subclass of: Restriction
  on property: part of
  some values from: Cotyledon
created by: Naama
creation date: 2011-01-17T11:47:14Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000378

seed germination inside fruit
type: Class
subclass of: germination
subclass of: post harvest quality
definition: The seed begins germinating inside the fruit. Often associated with a delay in fruit harvesting (the fruit is too ripe), the pre- germination could also be caused by an altered fruit flesh pH or by hormonal imbalance.
created by: Naama
creation date: 2011-01-31T09:54:16Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000379

Axiom
annotated source: seed germination inside fruit
annotated property: definition
annotated target: The seed begins germinating inside the fruit. Often associated with a delay in fruit harvesting (the fruit is too ripe), the pre- germination could also be caused by an altered fruit flesh pH or by hormonal imbalance.
database_cross_reference: LycoTILL:OD

increased fruit number
type: Class
subclass of: fruit number
created by: Naama
creation date: 2011-01-31T09:59:18Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000380

decreased fruit number
type: Class
subclass of: fruit number
created by: Naama
creation date: 2011-01-31T09:59:18Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000381

no fruit setting
type: Class
subclass of: fruit number
created by: Naama
creation date: 2011-01-31T09:59:18Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000382

intermediate inflorescence
type: Class
subclass of: inflorescence structure - phenotypic values
created by: Naama
creation date: 2011-09-16T02:49:09Z
database_cross_reference: PO:0001083
database_cross_reference: PO:0009049
has_obo_namespace: solanaceae_phenotype
id: SP:0000383

fruit height at widest position asymmetry
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape eccentric
definition: The ratio of the height at which the maximum width occurs, to the maximum height.
created by: Naama
creation date: 2011-09-26T10:46:06Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000384

Axiom
annotated source: fruit height at widest position asymmetry
annotated property: definition
annotated target: The ratio of the height at which the maximum width occurs, to the maximum height.
database_cross_reference: SGN:EVDK

sugars
type: Class
subclass of: biochemical metabolites
created by: Naama
creation date: 2012-11-01T04:06:13Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000385

fructose
type: Class
subclass of: sugars
created by: Naama
creation date: 2012-11-01T04:07:53Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000386

field sucrose
type: Class
subclass of: sucrose
definition: sucrose measured in the field (mg/g fresh weight).
created by: Naama
creation date: 2012-11-01T04:16:50Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000387

Axiom
annotated source: field sucrose
annotated property: definition
annotated target: sucrose measured in the field (mg/g fresh weight).
database_cross_reference: SGN:NM

storage sucrose
type: Class
subclass of: post harvest quality
subclass of: sucrose
definition: sucrose measured in storage (mg/g fresh weight).
created by: Naama
creation date: 2012-11-01T04:18:34Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000388

Axiom
annotated source: storage sucrose
annotated property: definition
annotated target: sucrose measured in storage (mg/g fresh weight).
database_cross_reference: SGN:NM

field glucose
type: Class
subclass of: glucose
definition: glucose measured in the field (mg/g fresh weight)
created by: Naama
creation date: 2012-11-01T04:19:27Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000389

Axiom
annotated source: field glucose
annotated property: definition
annotated target: glucose measured in the field (mg/g fresh weight)
database_cross_reference: SGN:NM

storage glucose
type: Class
subclass of: post harvest quality
subclass of: glucose
definition: glucose measured in the field (mg/g fresh weight).
created by: Naama
creation date: 2012-11-01T04:19:27Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000390

Axiom
annotated source: storage glucose
annotated property: definition
annotated target: glucose measured in the field (mg/g fresh weight).
database_cross_reference: SGN:NM

potato fry color
type: Class
subclass of: processing quality
definition: potato fry color rating based on reflectance measured from light to dark.
created by: Naama
creation date: 2012-11-01T04:24:02Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000391

Axiom
annotated source: potato fry color
annotated property: definition
annotated target: potato fry color rating based on reflectance measured from light to dark.
database_cross_reference: SGN:NM

tuber flesh color blue
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2012-11-02T04:02:18Z
database_cross_reference: PATO:0000952
database_cross_reference: PO:0025038
database_cross_reference: solcap:1
has_obo_namespace: solanaceae_phenotype
id: SP:0000392

tuber flesh color dark-yellow to orange
type: Class
subclass of: tuber flesh color
created by: Naama
creation date: 2012-11-02T04:03:23Z
database_cross_reference: PATO:0001944
database_cross_reference: PO:0025038
database_cross_reference: solcap:5
has_obo_namespace: solanaceae_phenotype
id: SP:0000393

fruit dry weight percentage
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit mass, weight in grams
definition: Net dry weight (after 1 week in oven) divided by net fresh weight of the fruit and multiplied by 100.
created by: naama
creation date: 2017-02-06T15:17:20Z
has_exact_synonym: fruit solids percentage
has_obo_namespace: solanaceae_phenotype
id: SP:0000394

Axiom
annotated source: fruit dry weight percentage
annotated property: definition
annotated target: Net dry weight (after 1 week in oven) divided by net fresh weight of the fruit and multiplied by 100.
database_cross_reference: SGN:EVDK

columella and placenta area measurement in square centimeters, cm^2
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit size
definition: The area of the fruit columella and placenta in cm^2. The area of the fruit columella and placenta of fruits sliced at the equatorial axis.
created by: naama
creation date: 2017-09-07T14:56:35Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000395

Axiom
annotated source: columella and placenta area measurement in square centimeters, cm^2
annotated property: definition
annotated target: The area of the fruit columella and placenta in cm^2. The area of the fruit columella and placenta of fruits sliced at the equatorial axis.
database_cross_reference: SGN:EVDK

pericarp cell layers, counting
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: pericarp cells
definition: Number of cell layers in the tomato pericarp in axial abaxial axis. Counting the number of cells intersected by a line perpendicular to the exocarp, avoiding vascular bundles, endocarp layer, 2-4 small cell layers right bellow the exocarp, and 0-1 layers right above the endocarp.
created by: naama
creation date: 2017-09-07T14:58:51Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000396

Axiom
annotated source: pericarp cell layers, counting
annotated property: definition
annotated target: Number of cell layers in the tomato pericarp in axial abaxial axis. Counting the number of cells intersected by a line perpendicular to the exocarp, avoiding vascular bundles, endocarp layer, 2-4 small cell layers right bellow the exocarp, and 0-1 layers right above the endocarp.
database_cross_reference: SGN:NM

pericarp cells
type: Class
subclass of: pericarp
created by: naama
creation date: 2017-09-07T15:00:10Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000397

pericarp max cell size, calculation in square micrometers, um^2
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: pericarp cells
definition: Size of the biggest tomato cells in the pericarp in um^2.
created by: naama
creation date: 2017-09-07T15:00:56Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000398

Axiom
annotated source: pericarp max cell size, calculation in square micrometers, um^2
annotated property: definition
annotated target: Size of the biggest tomato cells in the pericarp in um^2.
database_cross_reference: SGN:NM

number of leaves between 2nd and 3rd inflorescence
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf number
created by: naama
creation date: 2017-09-07T15:16:39Z
database_cross_reference: PATO:0000053
database_cross_reference: PO:0007047
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
id: SP:0000399

number of leaves between 3rd and 4th inflorescence
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf number
created by: naama
creation date: 2017-09-07T15:17:08Z
database_cross_reference: PATO:0000053
database_cross_reference: PO:0007047
database_cross_reference: PO:0009025
has_obo_namespace: solanaceae_phenotype
id: SP:0000400

qualitative plant size
type: Class
subclass of: plant size
created by: naama
creation date: 2017-09-07T15:18:54Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000401

plant height
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: plant size
definition: The height of the full grown plant in cm.
created by: naama
creation date: 2017-09-07T15:19:52Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000402

Axiom
annotated source: plant height
annotated property: definition
annotated target: The height of the full grown plant in cm.
database_cross_reference: SGN:NM

plant height until first inflorescence
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: plant size
definition: The height of the plant until the first inflorescence in cm
created by: naama
creation date: 2017-09-07T15:20:37Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000403

Axiom
annotated source: plant height until first inflorescence
annotated property: definition
annotated target: The height of the plant until the first inflorescence in cm
database_cross_reference: SGN:NM

plant height until last inflorescence
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: plant size
definition: The height of the plant until the last inflorescence in cm
created by: naama
creation date: 2017-09-07T15:21:24Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000404

Axiom
annotated source: plant height until last inflorescence
annotated property: definition
annotated target: The height of the plant until the last inflorescence in cm
database_cross_reference: SGN:NM

total number of inflorescences
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: inflorescence
definition: Count of the number of inflorescences.
created by: naama
creation date: 2017-09-07T15:23:57Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000405

Axiom
annotated source: total number of inflorescences
annotated property: definition
annotated target: Count of the number of inflorescences.
database_cross_reference: SGN:EVDK

stem width
type: Class
subclass of: stem
definition: The width of the stem in mm
created by: naama
creation date: 2017-09-12T12:19:16Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000406

Stem width between 2nd and 3rd inflorescence (mm)
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: stem width
definition: Stem width between 2nd and 3rd inflorescence, measured in mm at complete developmental stage.
created by: naama
creation date: 2017-09-12T12:23:15Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000407

Axiom
annotated source: Stem width between 2nd and 3rd inflorescence (mm)
annotated property: definition
annotated target: Stem width between 2nd and 3rd inflorescence, measured in mm at complete developmental stage.
database_cross_reference: SGn:EVDK

Stem width between 3rd and 4th inflorescence (mm)
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: stem width
definition: Stem width between 3rd and 4th inflorescence, measured in mm at complete developmental stage.
created by: naama
creation date: 2017-09-12T12:24:40Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000408

Axiom
annotated source: Stem width between 3rd and 4th inflorescence (mm)
annotated property: definition
annotated target: Stem width between 3rd and 4th inflorescence, measured in mm at complete developmental stage.
database_cross_reference: SGn:EVDK

number of flowers in second inflorescence
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: flower number
definition: Count the number of flowers in the second inflorescence.
created by: naama
creation date: 2017-09-12T12:43:06Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000409

Axiom
annotated source: number of flowers in second inflorescence
annotated property: definition
annotated target: Count the number of flowers in the second inflorescence.
database_cross_reference: SGN:EVDK

number of flowers in third inflorescence
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: flower number
definition: Count the number of flowers in the third inflorescence.
created by: naama
creation date: 2017-09-12T12:44:18Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000410

Axiom
annotated source: number of flowers in third inflorescence
annotated property: definition
annotated target: Count the number of flowers in the third inflorescence.
database_cross_reference: SGN:EVDK

sepal
type: Class
subclass of: flower morphology
created by: naama
creation date: 2017-09-12T12:57:55Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000411

petal
type: Class
subclass of: Restriction
  on property: part of
  some values from: flower morphology
created by: naama
creation date: 2017-09-12T12:58:14Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000412

number of sepals
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: sepal
definition: Count sepals per flower.
created by: naama
creation date: 2017-09-12T12:58:24Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000413

Axiom
annotated source: number of sepals
annotated property: definition
annotated target: Count sepals per flower.
database_cross_reference: SGN:EVDK

number of petals
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: petal
definition: Count petals per flower.
created by: naama
creation date: 2017-09-12T12:59:11Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000414

Axiom
annotated source: number of petals
annotated property: definition
annotated target: Count petals per flower.
database_cross_reference: SGN:EVDK

petal lengh
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: petal
definition: Average length of petals from a representative flower per plant. Length measured in cm. from the centre of the flower to the end of the petal.
created by: naama
creation date: 2017-09-12T13:00:12Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000415

Axiom
annotated source: petal lengh
annotated property: definition
annotated target: Average length of petals from a representative flower per plant. Length measured in cm. from the centre of the flower to the end of the petal.
database_cross_reference: SGN:EVDK

petal width
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: petal
definition: Average width of petals from a representative flower per plant. Width measured in cm. between the join point of the petals.
created by: naama
creation date: 2017-09-12T13:01:44Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000416

Axiom
annotated source: petal width
annotated property: definition
annotated target: Average width of petals from a representative flower per plant. Width measured in cm. between the join point of the petals.
database_cross_reference: SGN:EVDK

sepal lengh
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: sepal
definition: Average length of sepals from a representative flower per plant. Length is measured in cm. from the pedicel to the end of the sepal.
created by: naama
creation date: 2017-09-12T13:03:58Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000417

Axiom
annotated source: sepal lengh
annotated property: definition
annotated target: Average length of sepals from a representative flower per plant. Length is measured in cm. from the pedicel to the end of the sepal.
database_cross_reference: SGN:EVDK

sepal width
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: sepal
definition: Average width of sepals from a representative flower per plant. Width was measured in cm. between the join point of the sepals.
created by: naama
creation date: 2017-09-12T13:04:04Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000418

Axiom
annotated source: sepal width
annotated property: definition
annotated target: Average width of sepals from a representative flower per plant. Width was measured in cm. between the join point of the sepals.
database_cross_reference: SGN:EVDK

anther
type: Class
subclass of: Restriction
  on property: part of
  some values from: stamen
created by: naama
creation date: 2017-09-12T13:35:52Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000419

pistil
type: Class
subclass of: Restriction
  on property: part of
  some values from: flower morphology
created by: naama
creation date: 2017-09-12T13:36:04Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000420

ovary
type: Class
subclass of: flower morphology
created by: naama
creation date: 2017-09-12T13:36:21Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000421

anther length measurement in cm
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: anther
definition: Length of the anthers in cm.
created by: naama
creation date: 2017-09-12T13:36:34Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000422

Axiom
annotated source: anther length measurement in cm
annotated property: definition
annotated target: Length of the anthers in cm.
database_cross_reference: SGN:EVDK

pistil length in cm
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: pistil
definition: Length of the pistil in cm.
created by: naama
creation date: 2017-09-12T13:37:40Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000423

Axiom
annotated source: pistil length in cm
annotated property: definition
annotated target: Length of the pistil in cm.
database_cross_reference: SGN:EVDK

ovary length
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: ovary
definition: Length of the ovary in cm.
created by: naama
creation date: 2017-09-12T13:38:20Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000424

Axiom
annotated source: ovary length
annotated property: definition
annotated target: Length of the ovary in cm.
database_cross_reference: SGN:EVDK

fruit curved height
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit length
definition: The height measured along a curved line through the fruit, passing through the midpoints of opposing pairs of points on either side of the distal and proximal points. cm.
created by: naama
creation date: 2017-09-12T13:58:59Z
database_cross_reference: PATO:0000122
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000425

Axiom
annotated source: fruit curved height
annotated property: definition
annotated target: The height measured along a curved line through the fruit, passing through the midpoints of opposing pairs of points on either side of the distal and proximal points. cm.
database_cross_reference: SGN:EVDK

curved fruit shape index
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit shape index
definition: The ratio of curved height to the width of the fruit at mid-curved-height, as measured perpendicular to the curved height line.
created by: naama
creation date: 2017-09-12T14:03:15Z
database_cross_reference: PO:0007010
database_cross_reference: PO:0007042
database_cross_reference: PO:0009001
has_obo_namespace: solanaceae_phenotype
id: SP:0000426

Axiom
annotated source: curved fruit shape index
annotated property: definition
annotated target: The ratio of curved height to the width of the fruit at mid-curved-height, as measured perpendicular to the curved height line.
database_cross_reference: SGN:EVDK

stem length
type: Class
subclass of: stem
created by: naama
creation date: 2017-09-22T12:03:07Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000427

stem length between 1st and 10th true leaves (cm)
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: stem length
definition: The distance between the 1st and the 10th leaf in cm. Recorded at complete developmental stage.
created by: naama
creation date: 2017-09-22T12:03:26Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000428

Axiom
annotated source: stem length between 1st and 10th true leaves (cm)
annotated property: definition
annotated target: The distance between the 1st and the 10th leaf in cm. Recorded at complete developmental stage.
database_cross_reference: SGn:EVDK

inflorescence length
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: inflorescence
definition: The distance from the stem to the last flower along the rachis of the inflorescence.
created by: naama
creation date: 2017-09-22T12:06:11Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000429

Axiom
annotated source: inflorescence length
annotated property: definition
annotated target: The distance from the stem to the last flower along the rachis of the inflorescence.
database_cross_reference: SGN:EVDK

endocarp Lab-scale color
type: Class
subclass of: endocarp cross section color
created by: naama
creation date: 2017-09-22T13:21:52Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000430

endocarp RGB-scale color
type: Class
subclass of: endocarp cross section color
created by: naama
creation date: 2017-09-22T13:23:11Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000431

epicarp Lab-scale color
type: Class
subclass of: epicarp color
created by: naama
creation date: 2017-09-22T13:25:16Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000432

epicarp Lab-scale 'L' value
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: epicarp Lab-scale color
definition: Epicarp 'L' color value was recorded in a point close to pistil scar. Color is recorded in L*a*b color system using a colorimeter.
created by: naama
creation date: 2017-09-22T13:25:35Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000433

Axiom
annotated source: epicarp Lab-scale 'L' value
annotated property: definition
annotated target: Epicarp 'L' color value was recorded in a point close to pistil scar. Color is recorded in L*a*b color system using a colorimeter.
database_cross_reference: SGN:EVDK

epicarp Lab-scale 'a' value
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: epicarp Lab-scale color
definition: Epicarp 'a' color value was recorded in a point close to pistil scar. Color is recorded in L*a*b color system using a colorimeter.
created by: naama
creation date: 2017-09-22T13:27:36Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000434

Axiom
annotated source: epicarp Lab-scale 'a' value
annotated property: definition
annotated target: Epicarp 'a' color value was recorded in a point close to pistil scar. Color is recorded in L*a*b color system using a colorimeter.
database_cross_reference: SGN:EVDK

epicarp Lab-scale 'b' value
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: epicarp Lab-scale color
definition: Epicarp 'b' color value was recorded in a point close to pistil scar. Color is recorded in L*a*b color system using a colorimeter.
created by: naama
creation date: 2017-09-22T13:27:50Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000435

Axiom
annotated source: epicarp Lab-scale 'b' value
annotated property: definition
annotated target: Epicarp 'b' color value was recorded in a point close to pistil scar. Color is recorded in L*a*b color system using a colorimeter.
database_cross_reference: SGN:EVDK

leaflets number
type: Class
subclass of: leaf number
created by: naama
creation date: 2017-09-22T13:40:25Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000436

number of primary leaflets per leaf
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaflets number
definition: Number of primary leaflets per leaf. Counting in fully opened leaves when the plant is completely developed.
created by: naama
creation date: 2017-09-22T13:40:46Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000437

Axiom
annotated source: number of primary leaflets per leaf
annotated property: definition
annotated target: Number of primary leaflets per leaf. Counting in fully opened leaves when the plant is completely developed.
database_cross_reference: SGN:EVDK

number of secondary leaflets per leaf
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaflets number
definition: Number of secondary leaflets per leaf. Counting in fully opened leaves when the plant is completely developed.
created by: naama
creation date: 2017-09-22T13:41:28Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000438

Axiom
annotated source: number of secondary leaflets per leaf
annotated property: definition
annotated target: Number of secondary leaflets per leaf. Counting in fully opened leaves when the plant is completely developed.
database_cross_reference: SGN:EVDK

leaf habit
type: Class
subclass of: leaf
definition: Traits related to leaf habit.
created by: naama
creation date: 2017-12-14T15:53:18Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000439

leaf habit visual rating 1-9 scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf habit
definition: Description of the way the leaves are held naturally. Recorded at complete developmental stage of the plant. Visual rating 1-9 score (1:semi-erect, 3:semi-horizontal, 5:horizontal, 7:horizontal-drooping, 9:drooping).
created by: naama
creation date: 2017-12-14T15:55:33Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000440

Axiom
annotated source: leaf habit visual rating 1-9 scale
annotated property: definition
annotated target: Description of the way the leaves are held naturally. Recorded at complete developmental stage of the plant. Visual rating 1-9 score (1:semi-erect, 3:semi-horizontal, 5:horizontal, 7:horizontal-drooping, 9:drooping).
database_cross_reference: SGN:NM

stem anthocyanin content
type: Class
subclass of: Variables
subclass of: Restriction
  on property: part of
  some values from: hypocotyl
subclass of: Restriction
  on property: variable_of
  some values from: anthocyanin content
definition: Anthocyanin content in the stem of mature plants.
created by: naama
creation date: 2017-12-15T15:43:57Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000441

petals curvature observation 1-7 scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: petal
definition: The common position of the petals of fully opened flowers. 1-7 score (3:low, 5:intermediate, 7:strong).
created by: naama
creation date: 2017-12-15T16:58:22Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000442

Axiom
annotated source: petals curvature observation 1-7 scale
annotated property: definition
annotated target: The common position of the petals of fully opened flowers. 1-7 score (3:low, 5:intermediate, 7:strong).
database_cross_reference: SGN:NM

stamen
type: Class
subclass of: Restriction
  on property: part of
  some values from: flower morphology
created by: naama
creation date: 2017-12-15T17:14:56Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000443

stamen color observation 3-7 scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: stamen
definition: Stamen color of fully opened flowers. 3-7 scale (3:yellow, 5:pale orange, 7:orange).
created by: naama
creation date: 2017-12-15T17:16:28Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000444

Axiom
annotated source: stamen color observation 3-7 scale
annotated property: definition
annotated target: Stamen color of fully opened flowers. 3-7 scale (3:yellow, 5:pale orange, 7:orange).
database_cross_reference: SGN:NM

style
type: Class
subclass of: Restriction
  on property: part of
  some values from: pistil
created by: naama
creation date: 2017-12-21T16:11:56Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000445

style exertion. Visual rating 1-4
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: style
definition: The position of the style compared to the stamens. 1-4 score (1:inserted, 2:same level as stamen, 3:slightly exerted, 4:highly exerted).
created by: naama
creation date: 2017-12-21T16:13:08Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000446

Axiom
annotated source: style exertion. Visual rating 1-4
annotated property: definition
annotated target: The position of the style compared to the stamens. 1-4 score (1:inserted, 2:same level as stamen, 3:slightly exerted, 4:highly exerted).
database_cross_reference: SGN:NM

fruit color phenotypic values
type: Class
subclass of: epicarp color
definition: Historic terms - avoid using for future trials/experiments.
created by: naama
creation date: 2017-12-21T16:20:16Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000447

Axiom
annotated source: fruit color phenotypic values
annotated property: definition
annotated target: Historic terms - avoid using for future trials/experiments.
database_cross_reference: SGN:NM

immature green fruit epicarp color, observation nominal scale 3-9
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: epicarp color
subclass of: Restriction
  on property: variable_of
  some values from: immature green fruit
definition: Color observation of immature green fruit. 3-9 score (3:green-white, 5:light green, 7:green, 9:dark green).
created by: naama
creation date: 2017-12-22T14:40:01Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000448

Axiom
annotated source: immature green fruit epicarp color, observation nominal scale 3-9
annotated property: definition
annotated target: Color observation of immature green fruit. 3-9 score (3:green-white, 5:light green, 7:green, 9:dark green).
database_cross_reference: SGN:NM

epicarp fruit color, observation nominal scale 0-6
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: epicarp color
definition: Fruit color of the epicarp. Exterior color of mature fruit. 0-6 score (0:yellow, 1:yellow-orange, 2:orange, 3:red-orange, 4:pink, 5:red, 6:intense red).
created by: naama
creation date: 2017-12-22T15:06:06Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000449

Axiom
annotated source: epicarp fruit color, observation nominal scale 0-6
annotated property: definition
annotated target: Fruit color of the epicarp. Exterior color of mature fruit. 0-6 score (0:yellow, 1:yellow-orange, 2:orange, 3:red-orange, 4:pink, 5:red, 6:intense red).
database_cross_reference: SGN:NM

fruit skin color. Nominal score 0-1
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: epicarp color
definition: The color of the fruit epidermis. 0-1 score (0:colorless, 1:yellow).
created by: naama
creation date: 2017-12-22T15:10:17Z
has_exact_synonym: fruit epidermis color
has_obo_namespace: solanaceae_phenotype
id: SP:0000450

Axiom
annotated source: fruit skin color. Nominal score 0-1
annotated property: definition
annotated target: The color of the fruit epidermis. 0-1 score (0:colorless, 1:yellow).
database_cross_reference: SGN:NM

fruit pedicel scar
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit morphology
created by: naama
creation date: 2017-12-22T15:29:59Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000451

fruit pedicel scar width. Observation 3-7 nominal scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit pedicel scar
definition: Scar width at the widest part of the pedicel scar. 3-7 score (3:narrow, 5:medium, 7:wide).
created by: naama
creation date: 2017-12-22T15:30:20Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000452

Axiom
annotated source: fruit pedicel scar width. Observation 3-7 nominal scale
annotated property: definition
annotated target: Scar width at the widest part of the pedicel scar. 3-7 score (3:narrow, 5:medium, 7:wide).
database_cross_reference: SGN:NM

immature green fruit
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit ripening
created by: naama
creation date: 2017-12-22T15:35:04Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000453

longitudinal stripes presence on immature green fruits. Observation 0-1 scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: immature green fruit
definition: Presence of longitudinal stripes on immature fruits. 0-1 score (0:absence, 1:present).
created by: naama
creation date: 2017-12-22T15:36:50Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000454

Axiom
annotated source: longitudinal stripes presence on immature green fruits. Observation 0-1 scale
annotated property: definition
annotated target: Presence of longitudinal stripes on immature fruits. 0-1 score (0:absence, 1:present).
database_cross_reference: SGN:NM

leaf dissection
type: Class
subclass of: leaf morphology
created by: naama
creation date: 2017-12-22T15:45:56Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000455

leaf dissection. Observation 0-2 nominal scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf dissection
definition: The extent of dissection in a fully opened leaf. 0-2 score (0:low, 1:intermediate, 2:high).
created by: naama
creation date: 2017-12-22T15:47:00Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000456

Axiom
annotated source: leaf dissection. Observation 0-2 nominal scale
annotated property: definition
annotated target: The extent of dissection in a fully opened leaf. 0-2 score (0:low, 1:intermediate, 2:high).
database_cross_reference: SGN:NM

leaf border
type: Class
subclass of: leaf morphology
created by: naama
creation date: 2017-12-22T15:49:28Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000457

leaf border variable. Observation 0-3 nominal scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf border
definition: The outline of fully opened leaf. 0-3 score (0:entire, 1:undulate, 2:serrated, 3:strong serrated).
created by: naama
creation date: 2017-12-22T15:52:41Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000458

Axiom
annotated source: leaf border variable. Observation 0-3 nominal scale
annotated property: definition
annotated target: The outline of fully opened leaf. 0-3 score (0:entire, 1:undulate, 2:serrated, 3:strong serrated).
database_cross_reference: SGN:NM

proximal angle micro 3%
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end angle
definition: The angle between best-fit lines drawn through the fruit perimeter on either side of the proximal end point. The Micro Distance setting determines the percentage of the perimeter from the proximal end point at which to center the linear regression points used to find the best-fit line. The points comprising 1.5% of the perimeter on either side of that center point are used in the regression.
created by: naama
creation date: 2017-12-22T15:55:07Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000459

Axiom
annotated source: proximal angle micro 3%
annotated property: definition
annotated target: The angle between best-fit lines drawn through the fruit perimeter on either side of the proximal end point. The Micro Distance setting determines the percentage of the perimeter from the proximal end point at which to center the linear regression points used to find the best-fit line. The points comprising 1.5% of the perimeter on either side of that center point are used in the regression.
database_cross_reference: SGN:EVDK

fruit calyx
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit end
created by: naama
creation date: 2018-01-02T11:48:52Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000460

Ribbing calyx end. Observation 0-9 scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit calyx
definition: An arrangement of ribs surrounding the calyx end of a full size fruit. 0-9 score (0:absent, 3:very weak, 5:weak, 7:intermediate, 9:strong).
created by: naama
creation date: 2018-01-02T11:49:08Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000461

Axiom
annotated source: Ribbing calyx end. Observation 0-9 scale
annotated property: definition
annotated target: An arrangement of ribs surrounding the calyx end of a full size fruit. 0-9 score (0:absent, 3:very weak, 5:weak, 7:intermediate, 9:strong).
database_cross_reference: SGN:NM

fruit size value
type: Class
subclass of: fruit size
definition: Historic phenotype values for fruit size.
created by: naama
creation date: 2018-01-09T15:13:55Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000462

fruit shape phenotypic values
type: Class
subclass of: fruit shape
definition: Phenotype values for fruit shape. Used historically, should not be used anymore for recording fruit traits/variables.
created by: naama
creation date: 2018-01-09T15:15:57Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000463

vascular bundle
type: Class
subclass of: Restriction
  on property: part of
  some values from: vascular tissue
created by: naama
creation date: 2018-03-29T14:49:24Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000464

vascular bundle content
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: vascular bundle
subclass of: Restriction
  on property: variable_of
  some values from: mature green fruit
definition: Scored in mature green fruit. Vascular bundles network for water transportation. It begins in the stem scar and runs to the locules through the placenta while also extending to the outer pericarp. Visual score 0-7 (0:absent, 3:slight, 5:intermediate, 7:severe).
created by: naama
creation date: 2018-03-29T14:49:36Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000465

Axiom
annotated source: vascular bundle content
annotated property: definition
annotated target: Scored in mature green fruit. Vascular bundles network for water transportation. It begins in the stem scar and runs to the locules through the placenta while also extending to the outer pericarp. Visual score 0-7 (0:absent, 3:slight, 5:intermediate, 7:severe).
database_cross_reference: SGN:MJD

mature green fruit
type: Class
subclass of: Restriction
  on property: part of
  some values from: fruit ripening
created by: naama
creation date: 2018-03-29T14:52:19Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000466

leaf type. Observation.
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf complexity
definition: 0-2 score (0:pimpinellifolium, 1:standard, 2:double feathered).
created by: naama
creation date: 2018-03-29T15:07:38Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000467

Axiom
annotated source: leaf type. Observation.
annotated property: definition
annotated target: 0-2 score (0:pimpinellifolium, 1:standard, 2:double feathered).
database_cross_reference: SGN:MJD

leaf complexity phenotpic values
type: Class
subclass of: leaf complexity
definition: terms used historically to describe leaf complexity mutations.
created by: naama
creation date: 2018-03-29T15:10:56Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000468

Axiom
annotated source: leaf complexity phenotpic values
annotated property: definition
annotated target: terms used historically to describe leaf complexity mutations.
database_cross_reference: SGN:NM

plant habit phenotypic values
type: Class
subclass of: plant habit index
definition: historic terms for describing plant habit mutations.
created by: naama
creation date: 2018-03-29T15:13:29Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000469

Axiom
annotated source: plant habit phenotypic values
annotated property: definition
annotated target: historic terms for describing plant habit mutations.
database_cross_reference: SGN:NM

plant growth habit, visual observation nominal scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: plant habit index
definition: 0-Determinate, 1-Semi-determinate, 2-Indeterminate.
created by: naama
creation date: 2018-03-29T15:14:29Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000470

Axiom
annotated source: plant growth habit, visual observation nominal scale
annotated property: definition
annotated target: 0-Determinate, 1-Semi-determinate, 2-Indeterminate.
database_cross_reference: SGN:MJD

leaf color phenotypic values
type: Class
subclass of: leaf color
definition: historic values for leaf color mutations.
created by: naama
creation date: 2018-03-29T15:17:03Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000471

Axiom
annotated source: leaf color phenotypic values
annotated property: definition
annotated target: historic values for leaf color mutations.
database_cross_reference: SGN:NM

green leaf color, visual observation 3-7 scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: leaf color
definition: 3:Light green, 5:medium green, 7:dark green.
created by: naama
creation date: 2018-03-29T15:17:54Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000472

Axiom
annotated source: green leaf color, visual observation 3-7 scale
annotated property: definition
annotated target: 3:Light green, 5:medium green, 7:dark green.
database_cross_reference: SGN:MJD

inflorescence structure - phenotypic values
type: Class
subclass of: inflorescence structure
definition: historic phenotypic values for inflorescence structure used for describing mutations.
created by: naama
creation date: 2018-03-29T15:24:30Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000473

Axiom
annotated source: inflorescence structure - phenotypic values
annotated property: definition
annotated target: historic phenotypic values for inflorescence structure used for describing mutations.
database_cross_reference: SGN:NM

inflorescence type, nominal scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: inflorescence structure
definition: 1: uniparous, 2: fishbone, 3: forked, 4- irregular.
created by: naama
creation date: 2018-03-29T15:25:57Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000474

Axiom
annotated source: inflorescence type, nominal scale
annotated property: definition
annotated target: 1: uniparous, 2: fishbone, 3: forked, 4- irregular.
database_cross_reference: SGN:MJD

leafy inflorescence, observation 0-2 scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: inflorescence structure
definition: Scored when the inflorescence is completely developed. 0-2 score (0:absent, 1:leaves, 2:leaves and shoots).
created by: naama
creation date: 2018-03-29T15:33:10Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000475

Axiom
annotated source: leafy inflorescence, observation 0-2 scale
annotated property: definition
annotated target: Scored when the inflorescence is completely developed. 0-2 score (0:absent, 1:leaves, 2:leaves and shoots).
database_cross_reference: SGN:MJD

flower color phenotypic values
type: Class
subclass of: flower color
definition: Historic values used to describe flower color mutants.
created by: naama
creation date: 2018-03-29T15:40:35Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000476

Axiom
annotated source: flower color phenotypic values
annotated property: definition
annotated target: Historic values used to describe flower color mutants.
database_cross_reference: SGN:NM

flower color, observation 1-7 nominal scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: flower color
definition: 3: Pale yellow, 5: Yellow, 7: Yellow-orange.
created by: naama
creation date: 2018-03-29T15:41:30Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000477

Axiom
annotated source: flower color, observation 1-7 nominal scale
annotated property: definition
annotated target: 3: Pale yellow, 5: Yellow, 7: Yellow-orange.
database_cross_reference: SGN:NM

proximal fruit end color, observation 0-7 nominal scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: proximal fruit end color
definition: 0: Uniform, 3: Light green, 5: Medium green, 7: Dark green.
created by: naama
creation date: 2018-03-29T15:44:49Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000478

Axiom
annotated source: proximal fruit end color, observation 0-7 nominal scale
annotated property: definition
annotated target: 0: Uniform, 3: Light green, 5: Medium green, 7: Dark green.
database_cross_reference: SGN:MJD

distal fruit end scar shape
type: Class
subclass of: distal fruit end scar
created by: naama
creation date: 2018-03-29T15:47:45Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000479

distal fruit end scar shape, observation 1-7 nominal scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: distal fruit end scar shape
definition: 1: dot, 3: linear, 5: star, 7: irregular.
created by: naama
creation date: 2018-03-29T15:48:06Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000480

Axiom
annotated source: distal fruit end scar shape, observation 1-7 nominal scale
annotated property: definition
annotated target: 1: dot, 3: linear, 5: star, 7: irregular.
database_cross_reference: SGN:MJD

fruit fasciation
type: Class
subclass of: fruit shape
created by: naama
creation date: 2018-03-29T15:50:50Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000481

fruit fasciation, observation 0-7 ordinal scale
type: Class
subclass of: Variables
subclass of: Restriction
  on property: variable_of
  some values from: fruit fasciation
definition: 0: Not present, 3: low, 5: intermediate, 7: severe.
created by: naama
creation date: 2018-03-29T15:51:48Z
has_obo_namespace: solanaceae_phenotype
id: SP:0000482

Axiom
annotated source: fruit fasciation, observation 0-7 ordinal scale
annotated property: definition
annotated target: 0: Not present, 3: low, 5: intermediate, 7: severe.
database_cross_reference: SGN:MJD

Variables
type: Class
has_obo_namespace: Solanaceae_variables
id: SP:0000500

male sterility
type: Class
subclass of: partial sterility
subclass of: full sterility
database_cross_reference: PO:0007042
database_cross_reference: PO:0007616
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000437
id: SP:0000706

female sterility
type: Class
subclass of: partial sterility
subclass of: full sterility
database_cross_reference: PO:0007042
database_cross_reference: PO:0007616
database_cross_reference: PO:0009046
has_obo_namespace: solanaceae_phenotype
has_related_synonym: TO:0000358
id: SP:0000707

Solanaceae phenotype ontology
type: Class
has_obo_namespace: solanaceae_phenotype
id: SP:0001000